Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Sensor protein of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  107 bits (268), Expect = 5e-28
 Identities = 82/275 (29%), Positives = 135/275 (49%), Gaps = 24/275 (8%)

Query: 82  LVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHAQQQAAKLLVRGLAH 141
           +V+ +   +L  T+    WH+        R     R L   + +  +  A   L  G+AH
Sbjct: 205 IVLSALAAVLLATLLAFFWHQ--------RYQRSHRELLDAMKRKEKLVAMGHLAAGVAH 256

Query: 142 EIKNPLGGLRGAAQLL-ERMLPDPALMEYTQIIIEQADRLRGLVDRLLGPQRPGEKKWE- 199
           EI+NPL  ++G A+   ER        E  Q++ ++ADRL  +V  LL   +P     + 
Sbjct: 257 EIRNPLSSIKGLAKYFAERTPAGGESHELAQVMAKEADRLNRVVSELLELVKPAHLTLQT 316

Query: 200 -NLHLILEKVRQLVELEAGANLVFER-DYDPSLPNILMDTDQIEQALLNIVSNAAQILTN 257
            NL+ I+     LV  +A +  +  R   + +L  I  D D++ Q LLN+  NA   +  
Sbjct: 317 VNLNDIITHSLNLVSQDAQSREIQLRFTANETLKRIQADPDRLTQVLLNLYLNAIHAIGR 376

Query: 258 QTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPPELQDTLFYPMVSGREGGTGL 317
           Q  G I++  +      +          I + D+G GI P+  + +F P  + +  GTGL
Sbjct: 377 Q--GTISVEAKESGTDRV---------IITVTDSGKGIAPDQLEAIFTPYFTTKADGTGL 425

Query: 318 GLSISQNLIDQHQGKIEVQSWPGR-TVFTIYLPIL 351
           GL++ QN+I+QH G I+V+S  G+  VFTI+LP++
Sbjct: 426 GLAVVQNIIEQHGGAIKVKSIEGKGAVFTIWLPVI 460