Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., sensory histidine kinase in two-component regulatory system with GlnG (NCBI) from Escherichia coli BW25113

 Score =  390 bits (1003), Expect = e-113
 Identities = 200/340 (58%), Positives = 256/340 (75%), Gaps = 4/340 (1%)

Query: 11  IINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPLQ 70
           I+N+ + S+L++D++L I YANPAA+QL +QS+++L    L  L+ + SL+++L+ + L+
Sbjct: 12  ILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNIELMQESLE 71

Query: 71  SGQSITDSDVTLVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHAQQQ 130
           +GQ  TD++VTLVID +  +L VT   +    + ++L EM  +  QRRL+QE  QHAQQ 
Sbjct: 72  AGQGFTDNEVTLVIDGRSHILSVTAQRMP---DGMILLEMAPMDNQRRLSQEQLQHAQQV 128

Query: 131 AAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADRLRGLVDRLLGP 190
           AA+ LVRGLAHEIKNPLGGLRGAAQLL + LPDP+L+EYT++IIEQADRLR LVDRLLGP
Sbjct: 129 AARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDRLLGP 188

Query: 191 QRPGEKKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDTDQIEQALLNIVSN 250
           Q PG +  E++H + E+V  LV +E   N+   RDYDPSLP +  D DQIEQ LLNIV N
Sbjct: 189 QLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLNIVRN 248

Query: 251 AAQILTNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPPELQDTLFYPMVSG 310
           A Q L     G I LRTRT  Q  +HG+R++L A I++ DNGPGIPP LQDTLFYPMVSG
Sbjct: 249 ALQAL-GPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFYPMVSG 307

Query: 311 REGGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTIYLPI 350
           REGGTGLGLSI++NLIDQH GKIE  SWPG T F++YLPI
Sbjct: 308 REGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPI 347