Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., PAS domain-containing protein from Phocaeicola dorei CL03T12C01

 Score = 87.8 bits (216), Expect = 5e-22
 Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 29/257 (11%)

Query: 106 LLAEMRTIGQQRRLTQELNQHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLE-RMLPDP 164
           L +E  T+   + ++ EL++   +  +KL  R L HEI N +  +   +Q L  R   D 
Sbjct: 197 LNSETITLLAIKDISNELSEKESESWSKL-TRVLTHEIMNTIAPIVSLSQTLSLRPGTDE 255

Query: 165 ALMEYTQIIIEQADRLRGLVD---RLLGPQRPGEKKWE------NLHLILEKVRQLVELE 215
            ++    +I EQ++RL    +   RL     P +K++       NL L+L+   +     
Sbjct: 256 KVIRGLGVIREQSERLMEFTESYRRLSYMPEPKKKRFSLTDSLHNLGLLLQSDFE----- 310

Query: 216 AGANLVFERDYDPSLPNILMDTDQIEQALLNIVSNAAQILTNQTHGVITLRTRTVHQANI 275
             A++ F     PS   I  D  Q+ Q  LN++ N+ Q L  +T G I +      +  I
Sbjct: 311 -NAHIHFILRSTPSDIYIEGDEKQLSQVFLNLLKNSMQSLEGKTDGQIEVTLEVTDKLYI 369

Query: 276 HGQRHKLVASIEIIDNGPGIPPELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEV 335
                      +++DNG GIP ELQ+ +F P  + +  GTG+GLS+ + +I +H G + +
Sbjct: 370 -----------KLLDNGRGIPMELQEKIFVPFFTTKTEGTGIGLSLCRQIIKRHGGNLYL 418

Query: 336 Q-SWPGRTVFTIYLPIL 351
           Q S  GRT+F I  PI+
Sbjct: 419 QESGQGRTLFVIEWPIV 435