Pairwise Alignments

Query, 609 a.a., translational GTPase TypA from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., back-translocating elongation factor EF4, GTPase from Escherichia coli BL21

 Score =  159 bits (401), Expect = 4e-43
 Identities = 141/544 (25%), Positives = 248/544 (45%), Gaps = 65/544 (11%)

Query: 6   IEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNT 65
           ++ +RN +IIAH+DHGK+TL D+++Q  G L  R ++E +V+DS D+E+ERGITI A++ 
Sbjct: 1   MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDR-EMEAQVLDSMDLERERGITIKAQSV 59

Query: 66  AINWN-----DYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
            +++       Y++N +DTPGH DF  EV R ++  +  LL+VDA  G   QT      A
Sbjct: 60  TLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119

Query: 121 FAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVE 180
               L+ + V+NKID P A P+ V +++ D+   + ATD                A    
Sbjct: 120 MEMDLEVVPVLNKIDLPAADPERVAEEIEDIV-GIDATD----------------AVRCS 162

Query: 181 GETGENMEPLFQAIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQ 240
            +TG  ++ + + +V ++  P+ D +GPLQ  I    + +Y+GV+ + RIK G ++   +
Sbjct: 163 AKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDK 222

Query: 241 VTVIGADGKKRNGKIGTVLGYLGLQRSETDQATAGDIV-AVTGLGELKISDTICDVN--A 297
           V V+         ++G +     + R+E      G +V A+  +    + DT+      A
Sbjct: 223 VKVMSTGQTYNADRLG-IFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTLARNPA 281

Query: 298 LEALPPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDP 357
            +ALP     +P      QV    F      +   R+ L +L    +++ +L  E     
Sbjct: 282 EKALPGFKKVKP------QVYAGLFPVSSDDYEAFRDALGKLS---LNDASLFYEPESSS 332

Query: 358 D---KFRVSGRGELHLSILIENMRRE-GFELAVSRPEVILKHEDG--------------- 398
                FR    G LH+ I+ E + RE   +L  + P V+ + E                 
Sbjct: 333 ALGFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA 392

Query: 399 -----QLMEPFETVTIDVQEEHQGGIMEKIGMRKGELKDMSPDGKGRIRMDFVMP-SRGL 452
                +L EP     + + + + G ++     ++G   +M   G  ++ + + +P +  +
Sbjct: 393 VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHG-NQVALTYEIPMAEVV 451

Query: 453 IGFQTEFMTLTSGSGLLYHSFDHYGPHKGGVIGQRVNGVLVSNGTGKALTNALFNLQERG 512
           + F     + + G   L ++F  +       +   +NG  V      AL     N Q RG
Sbjct: 452 LDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVD---ALALITHRDNSQNRG 508

Query: 513 RMFI 516
           R  +
Sbjct: 509 RELV 512