Pairwise Alignments

Query, 305 a.a., type II secretion system protein GspC from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., type II secretion system protein C from Enterobacter asburiae PDN3

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 23/207 (11%)

Query: 98  EQPVVVDAPKTRLSLVLSGVVASNDAQKSLAVIANRGVQATYGINEVIEG-TQAKLKAVM 156
           +QP  V  P   LS  + G+++S++A  S AVI     Q +Y   E++ G   A +  + 
Sbjct: 68  KQPAAVKKP---LSAEIEGILSSDEAWLSFAVIKTPAGQKSYREGEMLAGFDNAYIAEIH 124

Query: 157 PDRVIISNSGRDETLMLEGLDYTAPATASVSNPPRPRPNQPNAVPQFEDKVDAIREAIAR 216
           PD V+++  G  + + L+  DY      S               P  + K DA  + +  
Sbjct: 125 PDNVVVNYEGAPQVISLKKPDYFKGGVDSA--------------PVTKSKKDAGLDNL-- 168

Query: 217 NPQEIFQYVRLSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMN 276
               +  Y+ L  +    ++ GY ++P      +   GL+ GD+ V ++ +D+T      
Sbjct: 169 ---HLDDYLVLKPIIEKGQLEGYNINPRNASPFYSHAGLEKGDVVVKVDDVDMTKEAQAK 225

Query: 277 TLFQSMNEMTEMSLTVERDGQQHDVYI 303
            L    ++M E  + + R     ++ +
Sbjct: 226 ELVARWSKMKEADVVIRRHAHLENIRV 252