Pairwise Alignments

Query, 305 a.a., type II secretion system protein GspC from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., hypothetical protein from Dickeya dianthicola ME23

 Score = 43.9 bits (102), Expect = 2e-09
 Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 12/144 (8%)

Query: 30  GLTLLLLVASA-WTLGKMV-WVVSAEQTPVPTWSPTLSGLKA--ERQPLDISVLQKGE-- 83
           G++ L L A A W  G+   W VS +   +  +  T+   KA  ER     S + + +  
Sbjct: 14  GVSWLSLPAFAVWLFGQQDDWHVSGKIFYISHYFYTMQQKKAVTERHLFGESHVVENDGD 73

Query: 84  -LFGVFTEPKEAPVVEQPVVVDAPKTRLSLVLSGVVASNDAQKSLAVIANRGVQATYGIN 142
             F ++  P     + + ++  AP++   + L+G+V S DA  ++  + +  +Q TY   
Sbjct: 74  NAFRIYDHP-----LSEYIIQHAPESESPVKLTGIVYSADANAAMITVESDKIQQTYHTG 128

Query: 143 EVIEGTQAKLKAVMPDRVIISNSG 166
           +++     KL  ++PD +II + G
Sbjct: 129 DILSPENEKLLLILPDEIIIDSHG 152