Pairwise Alignments

Query, 305 a.a., type II secretion system protein GspC from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., hypothetical protein from Dickeya dadantii 3937

 Score = 49.3 bits (116), Expect = 6e-11
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 25  KPISEGLTLLLLVASAWTLGKM-VWVVSAEQTPVPTWSPTLSGLKA--ERQPLDISVLQK 81
           K IS  L L L+V SAW + +  VW  S     +  +  T    KA  ER     + + K
Sbjct: 10  KVISAILWLGLVVFSAWLIEQQNVWSSSGGTWYISHYFYTEQQKKAVTERHLFGEAHVIK 69

Query: 82  GE---LFGVFTEPKEAPVVEQPVVVDAPKTRLSLVLSGVVASNDAQKSLAVIANRGVQAT 138
            E    F ++  P     + + V+  AP+    + L+G+V S DA  +   +AN  +Q T
Sbjct: 70  SEGDNPFRIYDHP-----LSEYVIQHAPELESPVKLTGIVYSVDANAARITVANENIQQT 124

Query: 139 YGINEVIEGTQAKLKAVMPDRVIISNSG 166
           +   +++     K+  ++PD VII ++G
Sbjct: 125 FRAGDMLSSGNEKILLILPDEVIIDSNG 152