Pairwise Alignments

Query, 674 a.a., type II secretion system protein GspD from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Pectic enzymes secretion protein OutD from Alteromonas macleodii MIT1002

 Score =  114 bits (285), Expect = 1e-29
 Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 37/288 (12%)

Query: 343 QVLIEALIVEMAEGDGINLGVQWGSLESGSV--IQYGNTGASIGNVMIGLEEAKDTTQTK 400
           QV++EA I+E+   DG   GV+W  + SG    + +G +G +I +       A       
Sbjct: 292 QVVLEARIIEVTLNDGYQQGVRWDRIASGLTGSVNFGFSGGAIASNFAANTAAGIDPAIN 351

Query: 401 AVYDTNNNFLRNETTTTKGDYTKLASALSSIQGAAVSIAMGDWTALINAVSNDSSSNILS 460
           AV     N + N  +T  G  + L             I+ GD+  +IN +       +LS
Sbjct: 352 AV-----NGIGNSISTDIGGVSTLR------------ISRGDFDGVINMLQTQGDVQMLS 394

Query: 461 SPSITVMDNGEASFIVGEEVPVITGSTAGSNNDNPFQTVDRKEV-------GIKLKVVPQ 513
           +P +TV +N +A   VG++   +T   + S + +  QT +  ++       GI L V PQ
Sbjct: 395 NPRVTVTNNQKAVIKVGQDEYFVT-DVSTSEDQSATQTENENDIELTPFFSGIALDVTPQ 453

Query: 514 INEGNSVQLNIEQEVSNVLGANGAVDVRFAK----------RQLNTSVMVQDGQMLVLGG 563
           I+   SV L++   V+        + V   +          R+ +T +  +DG+++V+GG
Sbjct: 454 IDRSGSVILHVHPSVTETAEQTKVIQVGDQQILLPLAQSNIRESDTVIRARDGEIVVIGG 513

Query: 564 LIDERALESESKVPLLGDIPLLGQLFRSTSSQVEKKNLMVFIKPTIIR 611
           L++    E ESK PLLGDIP +G  F++ +    K+ L++ I+P++++
Sbjct: 514 LMETVTSEQESKTPLLGDIPFIGNAFKNKAKTQSKRELVILIRPSVVQ 561