Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., type IV-A pilus assembly ATPase PilB from Rhodanobacter sp000427505 FW510-R12

 Score =  360 bits (925), Expect = e-104
 Identities = 208/469 (44%), Positives = 299/469 (63%), Gaps = 19/469 (4%)

Query: 45  PLSMEALVETKRVVKHAFQLIELSQAEFESKLTQVYQRDSSEARQLMEDIGADSDDFFSL 104
           P+   AL E K    H+  ++E    E +S L +V +   +  R  M D+G    D   +
Sbjct: 114 PMQSHALDEIKF---HSNCMVEPILVERDS-LQRVIESLLNNMRNTMPDMGGGELDELDI 169

Query: 105 AEELPQNEDL----LESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGV 160
                + E        + DDAP++K +N +L +AI+ GASDIH E FE    +R R+DG+
Sbjct: 170 EGGEDEGESSSGIDANANDDAPVVKFVNKILIDAIRRGASDIHFEPFETQYRVRLRMDGI 229

Query: 161 LREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIGG-RAVDVRVSTMPSSHG 219
           L+ V +P  K+++ + SR+KVMA+LDIAEKRVPQDGRI L +   RA+D RVST+P+  G
Sbjct: 230 LKAVSSPPMKMANRISSRIKVMAQLDIAEKRVPQDGRIKLNLSKTRAIDFRVSTLPTLFG 289

Query: 220 ERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQ 279
           E++V+R+LD ++ R+ +  LG        +   I +P+G++LVTGPTGSGK+ +LY GL 
Sbjct: 290 EKIVLRILDGSSARMGIEKLGYEPDQQKLYVDAIHKPYGMVLVTGPTGSGKTVSLYTGLN 349

Query: 280 ELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLE 339
            LN++ERNI TVEDP+E  ++GI Q Q N +  MTFA  LR+ LRQDPDV+MVGEIRDLE
Sbjct: 350 MLNTAERNISTVEDPVEIRVEGINQVQQNVKRGMTFASALRSFLRQDPDVIMVGEIRDLE 409

Query: 340 TAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPD 399
           TA+IA++A+ TGH+V+STLHTN A   V+RL +MGI P+ I+SS+  ++AQRL R L  D
Sbjct: 410 TAEIAIKAAQTGHMVLSTLHTNDAAQTVSRLMNMGIAPYNITSSVSLIIAQRLARRL-HD 468

Query: 400 CKEPYEADKEQRKLFDSKKKEP-----LILYRATGCPKCNHKGYRGRTGIHELLLVDDAL 454
           CK+P E     + L D+   +      L +Y A GC  CN +GY+GR GI++++ + + +
Sbjct: 469 CKKPVEL--PPKVLLDAGFTQADIDAGLTIYEAVGCDSCN-EGYKGRVGIYQVMPMLEEI 525

Query: 455 QELIHSEAGEQAMEKHIRAT-TPSIRDDGLDKVRQGITSLEEVMRVTKE 502
           Q++I        + +  RA     +R   L KV+QG+TSL E+ RVTKE
Sbjct: 526 QKIILQGGNALQIAEVARAAGINDLRASALLKVKQGLTSLIEIDRVTKE 574