Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., type II secretion system ATPase GspE from Rhodanobacter sp000427505 FW510-R12

 Score =  392 bits (1006), Expect = e-113
 Identities = 206/433 (47%), Positives = 299/433 (69%), Gaps = 8/433 (1%)

Query: 74  SKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGE 133
           S++  + +R     R  M  I  + D   S AEE    E L +   +AP+I+L+N +L  
Sbjct: 148 SEIDGLIERYYGTGRSAMGTIVENLDG--SAAEE-DDVEHLRDLASEAPVIRLVNLILQR 204

Query: 134 AIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVP 193
           A+++ ASD+HIE FE  L +R+R+DGVL EV AP    ++ ++SRVK+MA+L+IAE+R+P
Sbjct: 205 AVEQRASDVHIEPFENRLKVRYRIDGVLHEVEAPPSSSTAAVISRVKIMARLNIAERRLP 264

Query: 194 QDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLI 253
           QDGRI LR+ G+ +D+RVST+P+S GE VVMR+LD+ +   D  SLG T      F  ++
Sbjct: 265 QDGRIQLRVQGKELDLRVSTVPTSFGESVVMRILDRESVVFDFASLGFTDRFQQRFVDVL 324

Query: 254 KRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDM 313
           +RPHGI+LVTGPTGSGK+TTLY  L  +N+++  I+TVEDP+E+ ++GI Q QV P++ +
Sbjct: 325 ERPHGILLVTGPTGSGKTTTLYTALSRINTNDVKIITVEDPVEYQLEGINQIQVKPQIGL 384

Query: 314 TFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDM 373
            F+  LR+I+RQDPDV+M+GE+RDLET +IA+Q++LTGHLV+STLHTN+A G +TRL DM
Sbjct: 385 DFSGALRSIMRQDPDVIMIGEMRDLETCRIAIQSALTGHLVLSTLHTNSAAGGITRLLDM 444

Query: 374 GIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKK---KEPLILYRATGC 430
           G+E +L+ S++ G+LAQRLVR L P+   PY+A  E  + F+  K   + P+ L++  G 
Sbjct: 445 GVEDYLLGSTINGILAQRLVRRLDPETAMPYDALPEVIEQFELHKYTDERPIRLWK-PGS 503

Query: 431 PKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRAT-TPSIRDDGLDKVRQG 489
              N  GYRGR  I E L + D L+ L+   A E  +E+  R+    ++ +DG+ K   G
Sbjct: 504 NAANPSGYRGRRAIMEFLTMSDPLRRLVMQRASEGDIERQARSEGMRTMYEDGIAKAVAG 563

Query: 490 ITSLEEVMRVTKE 502
           IT+LEEV+RVT+E
Sbjct: 564 ITTLEEVLRVTQE 576