Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) from Variovorax sp. SCN45

 Score =  478 bits (1231), Expect = e-139
 Identities = 253/488 (51%), Positives = 345/488 (70%), Gaps = 31/488 (6%)

Query: 17  LPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIE-LSQAEFESK 75
           LP++FA   +L+L+  +D  + +++  +  +  A+ E  R  K+  Q  E L+      +
Sbjct: 5   LPYAFARSQQLLLEETDD-GRYTLWMSSHPARSAVGEVSR--KYGVQTFEVLADGPLAQR 61

Query: 76  LTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAI 135
           ++  Y +  S A  ++ ++  D+D    + +ELP  EDLL S  DAPII+++NA+L +A 
Sbjct: 62  ISAAYAQGESSAAAVVSEVQNDAD-LSRMMQELPAVEDLLASAGDAPIIRMLNALLTQAA 120

Query: 136 KEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQD 195
           ++GASDIHIE +E+T S+RFR+DG LREV+ P+R L + L+SR+K+MA LDI+EKR+PQD
Sbjct: 121 RDGASDIHIEPYERTSSVRFRIDGTLREVVQPNRALHAALISRLKIMADLDISEKRLPQD 180

Query: 196 GRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKR 255
           GRISLRIG RAVDVRVST+PS+HGER V+RLLDK+ ++L L S+GM     D F +LI +
Sbjct: 181 GRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLTLESVGMQGDTLDRFEKLISQ 240

Query: 256 PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTF 315
           PHGIILVTGPTGSGK+TTLYA L  L++S  NI+TVEDPIE+++ G+GQTQ+N ++++TF
Sbjct: 241 PHGIILVTGPTGSGKTTTLYAALARLDASRSNIMTVEDPIEYELPGVGQTQINAKIELTF 300

Query: 316 ARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGI 375
           A+ LRAILRQDPDV+M+GEIRD ETAQIA+QASLTGHLV++TLHTN +V AVTRL DMG+
Sbjct: 301 AKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGHLVLATLHTNDSVSAVTRLTDMGV 360

Query: 376 EPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRATGCPKCNH 435
           EPFL+SSSLLGVLAQRLVR +C  C                            GC  C  
Sbjct: 361 EPFLLSSSLLGVLAQRLVRKVCTAC-------------------------AGAGCEVCGQ 395

Query: 436 KGYRGRTGIHELLLVDDALQELIHSEAGE-QAMEKHIRATTPSIRDDGLDKVRQGITSLE 494
            GY+GRTGI ELL+ D+ +Q LIHS+A E + ++   R     +R+DG   V+ GITS  
Sbjct: 396 TGYQGRTGIFELLVADETVQGLIHSKAAESELLQAGARGGLRLMREDGERLVQAGITSRA 455

Query: 495 EVMRVTKE 502
           E++RVT++
Sbjct: 456 ELLRVTRD 463