Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

 Score =  350 bits (898), Expect = e-101
 Identities = 189/422 (44%), Positives = 269/422 (63%), Gaps = 10/422 (2%)

Query: 80  YQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGA 139
           Y R + E     E + A+     S   E+  ++      D+  ++KLIN++  +AI+ GA
Sbjct: 144 YYRRTKEIVSFAEQLHAEHKTNDSFDFEITDSDS-----DEVTVVKLINSLFEDAIQVGA 198

Query: 140 SDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRIS 199
           SDIHIE     L +R R+DGVL E L     ++S LV R+K+MA LDI+EKR+PQDGR +
Sbjct: 199 SDIHIEPDANVLRLRQRIDGVLHETLLHEVNIASALVLRLKLMANLDISEKRLPQDGRFN 258

Query: 200 LRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGI 259
           +R+ G++VD+R+STMP  HGE VVMRLL+++A    L   G+  H     R  +KRPHG+
Sbjct: 259 IRVKGQSVDIRMSTMPIQHGESVVMRLLNQSAGVRKLEESGIPPHLLLRLRHQLKRPHGM 318

Query: 260 ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGL 319
           ILVTGPTGSGK+TTLY  L ELN+S + I+T EDP+E+ I  I Q QVNP++++ F+  L
Sbjct: 319 ILVTGPTGSGKTTTLYGALNELNTSGKKIITAEDPVEYRISRINQVQVNPKINLDFSTLL 378

Query: 320 RAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFL 379
           R  LRQDPD+++VGE+RD ET +I ++A+LTGHLV+STLHTN AV +  RL DMG   +L
Sbjct: 379 RTFLRQDPDIILVGEMRDQETVEIGLRAALTGHLVLSTLHTNDAVDSALRLIDMGAPGYL 438

Query: 380 ISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSK--KKEPLILYRATGCPKCNHKG 437
           ++S++  V+AQRLVR +CPDC    E D+ +R+   ++   +      R  GC  CN  G
Sbjct: 439 VASAVRAVVAQRLVRKVCPDCSGHDEVDEARRQWLVTRFPNQAAAKFTRGRGCQNCNLTG 498

Query: 438 YRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATT--PSIRDDGLDKVRQGITSLEE 495
           YRGR G+ E+L +D  + + + +     A  K  R+ T    +    ++   QGI SL+E
Sbjct: 499 YRGRIGVFEMLELDQPMMDCLRAN-DAVAFSKAARSNTDYKPLLASAMELALQGIVSLDE 557

Query: 496 VM 497
           VM
Sbjct: 558 VM 559