Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., General secretion pathway protein E from Sphingobium sp. HT1-2

 Score =  466 bits (1198), Expect = e-135
 Identities = 251/488 (51%), Positives = 333/488 (68%), Gaps = 10/488 (2%)

Query: 17  LPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIELSQAEFESKL 76
           +P+ FA +  +V+   +D  + SI          L+E +R +  +F +  +   +F+  L
Sbjct: 21  IPYGFARKHGVVM-LPQDGERLSIAVREGSDPRVLLEVRRHLARSFDVRFVEAPQFDRHL 79

Query: 77  TQVYQRDSSEARQLME-DIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAI 135
           +  Y  + S A      D+GAD  D   LA ++P  +DLL+S DDAP I+LIN ++ EA 
Sbjct: 80  SDHYAMEGSAAAMAGSIDVGADELDI--LAADIPTADDLLDSADDAPAIRLINGIIAEAA 137

Query: 136 KEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQD 195
           ++G SDIHIE +E  L +R RVDGVLRE L     ++ ++VSR+KVMA+LDIAE+RVPQD
Sbjct: 138 RQGVSDIHIEPYETGLIVRMRVDGVLRETLRMPPHVAPVVVSRIKVMARLDIAERRVPQD 197

Query: 196 GRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKR 255
           GRI L +GG+ +DVRVST+PS  GERVV+R+LDK    + L  LGMT      FR  +  
Sbjct: 198 GRIGLTLGGKLLDVRVSTLPSRAGERVVLRILDKENAGITLDLLGMTGAPDRIFREGLSE 257

Query: 256 PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTF 315
           P+GIILVTGPTGSGK+TTLYAGL+ LN   RNILTVEDP+E+ ++G+GQTQVN +V +TF
Sbjct: 258 PNGIILVTGPTGSGKTTTLYAGLRNLNDGSRNILTVEDPVEYAMEGVGQTQVNAKVGLTF 317

Query: 316 ARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGI 375
           A GLRAILRQDPDVVMVGEIRD ETA+IAVQASLTGHLV+ST+HTN AVGA+TR+RDM +
Sbjct: 318 AAGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTVHTNDAVGAITRMRDMRV 377

Query: 376 EPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKL--FDSKKKEPLILYRATGCPKC 433
           EPFL++S+L  V+AQRLVR LC  C+EP +ADK    L  FD       I+YRA GC +C
Sbjct: 378 EPFLLASTLRAVVAQRLVRRLCQHCREPVQADKSASALLGFD----PGTIIYRARGCDEC 433

Query: 434 NHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSL 493
           N  GY+GR G+ E + VDD ++ LI+    E  + +H     P++       VR G T+ 
Sbjct: 434 NGTGYKGRIGVFEAIRVDDTIRRLINDGGDESLIARHAFLNAPNLGSAARALVRDGQTTA 493

Query: 494 EEVMRVTK 501
           EE +RV++
Sbjct: 494 EEAIRVSR 501