Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

 Score =  467 bits (1202), Expect = e-136
 Identities = 259/451 (57%), Positives = 317/451 (70%), Gaps = 3/451 (0%)

Query: 51  LVETKRVVKHAFQLIELSQAEFESKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQ 110
           L E  RV      L  L  A F+ +L Q+YQ   +    L+E IG D  D  SL  E+P+
Sbjct: 35  LQELLRVHGQPSLLEYLEPALFDERLGQLYQAGDAATEALIEGIG-DQVDLDSLMSEMPR 93

Query: 111 NEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRK 170
            EDLLES+D+AP+I+LIN + G+A++  ASDIHIETFE++L +R RVDG LREVL P R 
Sbjct: 94  IEDLLESDDEAPVIRLINGLFGQALRLRASDIHIETFEQSLVVRLRVDGHLREVLRPPRA 153

Query: 171 LSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKN 230
           LS++LVSR+KVMA+LDIAEKR PQDGRI+LR  GR VDVRVST+P  HGERVVMR+LDK 
Sbjct: 154 LSAMLVSRIKVMARLDIAEKRQPQDGRITLRAAGREVDVRVSTLPGIHGERVVMRVLDKQ 213

Query: 231 ATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILT 290
           A+ L L +LGM A      R  + RP+GI+L TGPTGSGK+TTLYA L  LN   RNILT
Sbjct: 214 ASLLALDNLGMPAAVLQGLRSCLARPNGIVLSTGPTGSGKTTTLYASLNSLNDGSRNILT 273

Query: 291 VEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLT 350
           VEDP+E+ I GIGQT +NPR  +TFA GLRAILRQDPDV+M+GEIRD ETAQIAVQASLT
Sbjct: 274 VEDPVEYAIAGIGQTAINPRAGLTFASGLRAILRQDPDVIMLGEIRDQETAQIAVQASLT 333

Query: 351 GHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQ 410
           GHLV+STLHTN AVGAVTRLRDMGIEPFLI+S L GVLAQRLVR LC  C   +     +
Sbjct: 334 GHLVLSTLHTNNAVGAVTRLRDMGIEPFLIASCLRGVLAQRLVRRLC-SCAVAHPLQAAE 392

Query: 411 RKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKH 470
           R+L+          Y A GC +C   GY GR G++E + +D  L  L++  A E AM+ +
Sbjct: 393 RELWPELAALG-CSYHAVGCEQCQGSGYIGRLGLYEFIELDAGLIGLLYDGASELAMQDY 451

Query: 471 IRATTPSIRDDGLDKVRQGITSLEEVMRVTK 501
           +     S+     D + +G TSL EV+RV +
Sbjct: 452 LADRRQSLVAMASDCLARGETSLAEVLRVVQ 482