Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., type II secretion system protein GspE from Serratia liquefaciens MT49

 Score =  333 bits (854), Expect = 8e-96
 Identities = 181/387 (46%), Positives = 256/387 (66%), Gaps = 7/387 (1%)

Query: 115 LESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSL 174
           L  + DAP+++ IN  L  AI+  ASDIH E +++TL IR R+DGVL+ + +P   L++ 
Sbjct: 90  LNDDSDAPVVQFINQTLRIAIQRRASDIHFEPYQQTLRIRLRIDGVLQVITSPPFTLAAR 149

Query: 175 LVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRL 234
           L +R+K+M +LDIAE+R+PQDG++S+R+   +  +R++T+P+ HGE+VV+R+L      L
Sbjct: 150 LTARLKIMGQLDIAERRLPQDGQLSVRLDNASYSMRIATLPTLHGEKVVLRILQTERQEL 209

Query: 235 DLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDP 294
            L  LGM       F   +  P G+ILVTGPTGSGK+ TLY GL++LN ++ N+ +VEDP
Sbjct: 210 PLDRLGMDPTALVQFSSALSCPQGMILVTGPTGSGKTVTLYGGLRQLNDAQSNLCSVEDP 269

Query: 295 IEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLV 354
           IE  + GI QTQ N + ++ F+R LRA+LRQDPDV+M+GEIRD ETA+IAV+A+ TGHLV
Sbjct: 270 IEIPLFGINQTQTNAKTELDFSRVLRALLRQDPDVIMIGEIRDRETAEIAVKAAQTGHLV 329

Query: 355 MSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLF 414
           +STLHTN+    +TRL  MGI  +LI++ L  V+AQRLVR LC  C+  Y+     R  F
Sbjct: 330 LSTLHTNSTSETLTRLTHMGIPGYLIAACLKLVIAQRLVRKLCSHCR--YQQSLPVR--F 385

Query: 415 DSK-KKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQE-LIHSEAGEQAMEKHIR 472
            S     PL+ ++A GC  C   GY GRTG++ELL +   +Q  L+   A     E   +
Sbjct: 386 PSAIWATPLLPWKADGCEHC-FSGYYGRTGVYELLTITPEVQAGLLEGAAPSMLAEIARQ 444

Query: 473 ATTPSIRDDGLDKVRQGITSLEEVMRV 499
               ++   GL  V QG+TSLEEV R+
Sbjct: 445 QGQTTLLQAGLTLVAQGVTSLEEVYRI 471