Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Kangiella aquimarina DSM 16071

 Score =  335 bits (860), Expect = 2e-96
 Identities = 181/413 (43%), Positives = 270/413 (65%), Gaps = 6/413 (1%)

Query: 93  DIGADSDDFFSLAEELPQNEDLLESE-DDAPIIKLINAMLGEAIKEGASDIHIETFEKTL 151
           DI    D+  +  E+L + +   E++ +D  I+++++ +L  A KE ASDIHIE   +  
Sbjct: 169 DIKLQKDNTVTNLEQLIELKGAEEADANDQHIVQIVDWLLQYAFKERASDIHIEPRREVG 228

Query: 152 SIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRI-GGRAVDVR 210
            IRFR+DGVL +V      ++  ++SR+K++ ++D+AE+R P DGR+  +   G  +++R
Sbjct: 229 RIRFRIDGVLHKVYELPISITHAVISRLKILGRMDLAERRKPLDGRVKTKSPDGSEIELR 288

Query: 211 VSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGK 270
           +ST+P++ GE+ V R+ D      +   LG+ A     +R LI +P GI+L+TGPTGSGK
Sbjct: 289 LSTLPTAFGEKFVGRIFDPTVLTRNFDELGLEAETEATWRDLISQPTGIVLLTGPTGSGK 348

Query: 271 STTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVV 330
           +TTLY  L+ L + E NI T+EDPIE     + Q QV+  +D+ FA G+RA+LRQDPD++
Sbjct: 349 TTTLYTSLKLLATPEVNICTIEDPIEMVDPNLNQMQVHHDIDLDFAAGVRALLRQDPDII 408

Query: 331 MVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQ 390
           M+GEIRD ETAQ+AVQA+LTGHLV+STLHTN A  A+TRL ++G+EP+L+++++LGV+AQ
Sbjct: 409 MIGEIRDKETAQMAVQAALTGHLVISTLHTNDAPSAMTRLIEIGVEPYLLNATMLGVMAQ 468

Query: 391 RLVRTLCPDCKEPYEADKEQRKLF---DSKKKEPLILYRATGCPKCNHKGYRGRTGIHEL 447
           RLVRTLC  CKE    D    K     + K   P  ++   GC +C H GY+GR GI+EL
Sbjct: 469 RLVRTLCKYCKEEVSTDPLAWKAMVGENQKVPMPEKIFHPVGCDRCRHTGYQGRQGIYEL 528

Query: 448 LLVDDALQELIHSEAGEQAMEKH-IRATTPSIRDDGLDKVRQGITSLEEVMRV 499
           L V D L+ L++  A  + + K  I      +R  G  KV  G+T+++EV+RV
Sbjct: 529 LKVTDDLKTLVYEGAQIRQLRKQGIEDGMNLLRVSGAYKVAAGLTTIDEVLRV 581