Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., type II secretion system protein GspE from Erwinia tracheiphila SCR3

 Score =  309 bits (792), Expect = 1e-88
 Identities = 175/399 (43%), Positives = 257/399 (64%), Gaps = 9/399 (2%)

Query: 106 EELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVL 165
           +++P     +ES D   + + ++ +L  AI++ ASDIHIE    TL IR RVDG+LR V 
Sbjct: 68  QKVPAAGITIESNDT--VTERVDQLLFLAIQQRASDIHIEPQANTLQIRIRVDGILRPVP 125

Query: 166 APSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMR 225
             S      L++R+K++A LDIAE+R+PQDG+ +L + G++   R+ST+P + GE+ V+R
Sbjct: 126 MLSSDNGPALLARLKILASLDIAERRMPQDGQFTLTLNGQSASFRLSTLPVNFGEKAVVR 185

Query: 226 LLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSE 285
           L+   +  + L +LGM       FR+ +++P G+ILVTGPTGSGK+ TLY+GL  LN   
Sbjct: 186 LMQNESQSVSLENLGMPRAALRRFRQALEQPQGLILVTGPTGSGKTFTLYSGLSYLNQPC 245

Query: 286 RNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAV 345
           RN+ +VEDPIE  + G+ QTQ++P+  + F R LRA+LRQDPDV+M+GEIRD ETA+IA+
Sbjct: 246 RNLCSVEDPIEIPLIGVNQTQIHPKTGLDFNRVLRALLRQDPDVIMIGEIRDAETAEIAI 305

Query: 346 QASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYE 405
           +A+ TGHLV+STLHTN+ +  + RLR +GI  +L++S+L  V++QRLVR LCP C+EP E
Sbjct: 306 KAAQTGHLVLSTLHTNSTIETLIRLRQIGIAGYLLASALKLVISQRLVRRLCPHCREPAE 365

Query: 406 ADKE-QRKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGE 464
                   L+    +     +RA GC +C + GY GR  + ELL V   LQ  I +   +
Sbjct: 366 TLAHFPPALWPGTVRN----WRAVGCARC-YSGYYGRLALFELLPVTAPLQNGIAAGLSQ 420

Query: 465 QAMEKHIRATT-PSIRDDGLDKVRQGITSLEEVMRVTKE 502
             +    +A +  S+   GL  V +G T+L E+ RV  E
Sbjct: 421 GKLSILAKAQSGNSLFVGGLHCVNRGDTTLAELNRVVGE 459