Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., type II secretion system protein GspE from Dickeya dianthicola ME23

 Score =  327 bits (839), Expect = 4e-94
 Identities = 198/476 (41%), Positives = 280/476 (58%), Gaps = 31/476 (6%)

Query: 27  LVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIEL-SQAEFESKLTQVYQRDSS 85
           L+LD +E     ++   A L  E LV   R   H   L+E    A  E +LT     ++ 
Sbjct: 20  LLLDMDEQVVSIAV---AGLVAEELVAALRFASHRRVLVEQWPAARLEQQLTSPQAEETI 76

Query: 86  EARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIE 145
              Q+                        L+  DDAP+++ IN  L  AI+  ASDIH E
Sbjct: 77  APYQVAATA--------------------LDEPDDAPVVQFINQTLKLAIQRRASDIHFE 116

Query: 146 TFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGR 205
                  +R R+DGVL E  +    L+  L++R+K+M KL+IAE+R+PQDG+ SLR+   
Sbjct: 117 PLPAGYRVRLRIDGVLHETPSAPDSLAGRLIARLKIMGKLNIAERRLPQDGQFSLRLDQH 176

Query: 206 AVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGP 265
           A  +R++T+P   GE+VV+R+L      L+L +LG+ A     F++ +  P G+ILVTGP
Sbjct: 177 AYSLRIATLPVQGGEKVVLRVLQTQQQALELDALGLPARALQQFKQALSLPQGLILVTGP 236

Query: 266 TGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQ 325
           TGSGK+ TLY+ ++ LN   RNI +VEDPIE  + GI QT ++    + FAR LRA+LRQ
Sbjct: 237 TGSGKTFTLYSAIRWLNDVSRNICSVEDPIEIPLAGINQTAIHAPSQLDFARVLRALLRQ 296

Query: 326 DPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLL 385
           DPDV+M+GEIRD ETA+IAV+A+ TGHLV+STLHTN+A   + RL  +GI  +L++++L 
Sbjct: 297 DPDVIMIGEIRDAETAEIAVKAAQTGHLVLSTLHTNSAADTLVRLGHLGIPGYLLAAALK 356

Query: 386 GVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIH 445
            V+AQRLVR LCP C++  E   +   L D+  + PL  +RATGC  C   GY GR  ++
Sbjct: 357 LVIAQRLVRRLCPHCRQLTE---DAVTLPDNLWQGPLRQWRATGCEHC-FSGYYGRAALY 412

Query: 446 ELLLVDDALQELIHSEA--GEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRV 499
           ELL V  ALQ+ +   A   + +    ++  T  +   GL  V +GITSLEEV RV
Sbjct: 413 ELLPVTPALQQALSGSASWSDNSQPLPLQRGT-GLLSAGLVLVHEGITSLEEVYRV 467