Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Flp pilus assembly complex ATPase component TadA from Dickeya dianthicola ME23

 Score =  483 bits (1242), Expect = e-141
 Identities = 244/463 (52%), Positives = 339/463 (73%), Gaps = 2/463 (0%)

Query: 40  IYYLAPLSMEALVETKRVVKHAFQLIELSQAEFESKLTQVYQRDSSEARQLMEDIGADSD 99
           IYY +    +A++   R       L  + +  F  ++   +Q     A ++M  +  D D
Sbjct: 27  IYYRSDAHPQAMMSALRYCPPGALLSAIDENAFAERIASTFQNSDQRASEVMAGLSEDLD 86

Query: 100 DFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDG 159
             + LA+ LP  E++L +ED+ PI+KLINA+L +A+KE ASD+HIETFE+ ++IRFR+DG
Sbjct: 87  -MYQLADALPVYEEILNNEDNPPIVKLINAILAQALKERASDVHIETFEQRVAIRFRLDG 145

Query: 160 VLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHG 219
           VL + L P R+LSSLLVSR+K+M++LDIAEKR PQDGR+SLRI GRAVDVRVS +PSS+G
Sbjct: 146 VLHKKLEPERRLSSLLVSRLKIMSRLDIAEKRKPQDGRMSLRILGRAVDVRVSVLPSSYG 205

Query: 220 ERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQ 279
           ER+V+RLLDK+A +LDL  LGM          L+ RP+GIILVTGPTGSGKS+TLYA + 
Sbjct: 206 ERIVLRLLDKSAVKLDLRQLGMPDAVKKKVASLVSRPNGIILVTGPTGSGKSSTLYAMIN 265

Query: 280 ELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLE 339
           EL+  + NI+T+EDP+E+DI  I QTQVN ++ MTFA+GLRAILRQDPDV+++GEIRD E
Sbjct: 266 ELDQEKLNIMTIEDPVEYDIANISQTQVNSKIGMTFAKGLRAILRQDPDVILIGEIRDQE 325

Query: 340 TAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPD 399
           TAQIAVQAS+TGHLV+STLHTNTA+ A+TR++DMGIEPF+++S+L  V+AQRLVR+LCP 
Sbjct: 326 TAQIAVQASMTGHLVLSTLHTNTALSALTRMQDMGIEPFMLASALNAVMAQRLVRSLCPH 385

Query: 400 CKEPYEADKEQRKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIH 459
           C++P      + ++     +E L  Y+A GCP C + GYRGRT I  L+++++ ++E I+
Sbjct: 386 CRQPVAITAAECQMLSVPWREGLTGYQAQGCPACFNTGYRGRTLIQALVVINEPIREGIY 445

Query: 460 SEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRVTKE 502
            +  E  +   +  +  S+  DG++KV  G+TS++EV+RVT E
Sbjct: 446 QQKNESELAA-LAGSEVSLSQDGINKVLAGLTSIDEVIRVTGE 487