Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., type II secretion system ATPase GspE from Dickeya dianthicola ME23

 Score =  620 bits (1599), Expect = 0.0
 Identities = 322/486 (66%), Positives = 388/486 (79%), Gaps = 3/486 (0%)

Query: 17  LPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIELSQAEFESKL 76
           LPFSFA   +++L  +E  + A +  +      AL+E +RV      + ++S  EFE +L
Sbjct: 15  LPFSFARAQQILLLQDESATAAEVVCVPGTPASALLEARRVAGVPLTVSQVSPEEFERQL 74

Query: 77  TQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIK 136
              YQRDS EAR+LMEDIG D D F++LAEELP ++DLL+ EDDAPII+LINAML EAIK
Sbjct: 75  VMRYQRDSEEARRLMEDIGNDID-FYTLAEELPDSDDLLDGEDDAPIIRLINAMLTEAIK 133

Query: 137 EGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDG 196
             ASDIHIETFE+ L IRFR+DGVLRE+L P R+L+SLLVSR+KVMAKLDIAEKRVPQDG
Sbjct: 134 HKASDIHIETFERHLLIRFRIDGVLREILRPQRQLASLLVSRIKVMAKLDIAEKRVPQDG 193

Query: 197 RISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRP 256
           R++LRIGGRA+DVRVST+PS++GERVV+RLLDKN+ RLDL +LGM  H+      LI RP
Sbjct: 194 RMALRIGGRAIDVRVSTLPSNYGERVVLRLLDKNSVRLDLETLGMAEHHRRQVDTLIHRP 253

Query: 257 HGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFA 316
           HGIILVTGPTGSGKSTTLYA L  LNS+ERNI+TVEDPIE++++GIGQTQVNP+VDMTFA
Sbjct: 254 HGIILVTGPTGSGKSTTLYAALSRLNSAERNIMTVEDPIEYELEGIGQTQVNPKVDMTFA 313

Query: 317 RGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIE 376
           RGLRAILRQDPDVV+VGEIRD ETAQIAVQASLTGHLV+STLHTN+A+GA++RL+DMGIE
Sbjct: 314 RGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGIE 373

Query: 377 PFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRATGCPKCNHK 436
           PFL+S+SLLGVLAQRLVRTLCP C++PY  D EQ K   +       LY   GC KCN+ 
Sbjct: 374 PFLLSTSLLGVLAQRLVRTLCPSCRQPYVIDDEQAK--QTGLAAGTTLYHPGGCEKCNYS 431

Query: 437 GYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEV 496
           GYRGRTGIHELLL+DD ++  IHS   E  + + +     +IR DGLDKV  G+T+ EEV
Sbjct: 432 GYRGRTGIHELLLIDDVVRTAIHSGESELGIARMLGDKRVTIRQDGLDKVLAGVTTWEEV 491

Query: 497 MRVTKE 502
           +RVTKE
Sbjct: 492 VRVTKE 497