Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Flp pilus assembly complex ATPase component TadA from Dickeya dadantii 3937

 Score =  476 bits (1226), Expect = e-139
 Identities = 246/463 (53%), Positives = 332/463 (71%), Gaps = 2/463 (0%)

Query: 40  IYYLAPLSMEALVETKRVVKHAFQLIELSQAEFESKLTQVYQRDSSEARQLMEDIGADSD 99
           IYY      +A++   R       L  + +  F  ++   +Q     A ++M  +  D D
Sbjct: 27  IYYRRDAHPQAIMSALRYCPPGALLSAIDEDAFAERIANTFQNSDQRASEVMAGLSKDLD 86

Query: 100 DFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDG 159
             + LA+ LP  E++L +ED+ PI+KLINA+L +A+KE ASD+HIETFE+ ++IRFR+DG
Sbjct: 87  -MYQLADVLPVYEEILNNEDNPPIVKLINAILAQALKEHASDVHIETFEQRVAIRFRLDG 145

Query: 160 VLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHG 219
           VL   L P R+LSSLLVSR+K+M++LDIAEKR PQDGR+SLRI GRAVDVRVS +PSSHG
Sbjct: 146 VLHTKLEPERRLSSLLVSRLKIMSRLDIAEKRKPQDGRMSLRILGRAVDVRVSVLPSSHG 205

Query: 220 ERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQ 279
           ERVV+RLLDKNA +LDL  LGM          L+ RP+GIILVTGPTGSGKS+TLYA + 
Sbjct: 206 ERVVLRLLDKNAVKLDLCQLGMPDAVRKKVASLVNRPNGIILVTGPTGSGKSSTLYAMIN 265

Query: 280 ELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLE 339
           EL+  + NI+T+EDP+E+DI  I QTQVN ++ MTFA+GLRAILRQDPDV+++GEIRD E
Sbjct: 266 ELDQEKLNIMTIEDPVEYDIANISQTQVNSKIGMTFAKGLRAILRQDPDVILIGEIRDQE 325

Query: 340 TAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPD 399
           TAQIAVQAS+TGHLV+STLHTNTA+ A+TRL+DMGIEPF+++S+L  V+AQRLVR LCP 
Sbjct: 326 TAQIAVQASMTGHLVLSTLHTNTAISALTRLQDMGIEPFMLASALNAVMAQRLVRCLCPH 385

Query: 400 CKEPYEADKEQRKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIH 459
           C++     + Q ++     +E +  YRA GCP C + GY GRT I  L+++++ ++  I+
Sbjct: 386 CRQRVTITEAQCQMLSVPWQEGMTGYRAQGCPTCFNTGYLGRTLIQALVVINEPMRVGIY 445

Query: 460 SEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRVTKE 502
            +  E  +   +     S+  DG++KV  G+TS +EV+RVT E
Sbjct: 446 QQKNESELTV-LADGAASLSQDGINKVLAGLTSFDEVIRVTGE 487