Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Type II traffic warden ATPase from Alteromonas macleodii MIT1002

 Score =  669 bits (1727), Expect = 0.0
 Identities = 344/495 (69%), Positives = 400/495 (80%), Gaps = 3/495 (0%)

Query: 8   PAERQSIRRLPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIEL 67
           P E    R+L FSFA R +++L+ NE  + A +Y+      +   E +R     F    +
Sbjct: 29  PEEEAGPRQLSFSFAKRNQVLLETNE--TPAVLYFTENTPFDVFAEVRRFYGEPFVPKTI 86

Query: 68  SQAEFESKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLI 127
              EFES LT  +QRDSS A+QLMED+G +SD  F+LAE+LP  EDLL+SEDDAPIIKLI
Sbjct: 87  PANEFESLLTSAFQRDSSAAKQLMEDLGNESD-LFALAEDLPDTEDLLDSEDDAPIIKLI 145

Query: 128 NAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDI 187
           NAMLGEAIKEGASDIHIETFE  L +RFRVDGVLRE+L P+RKLSS+LVSR+KVMAKLDI
Sbjct: 146 NAMLGEAIKEGASDIHIETFENQLVVRFRVDGVLREILRPNRKLSSMLVSRIKVMAKLDI 205

Query: 188 AEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHD 247
           AEKRVPQDGRI+LRI GRAVDVRVSTMPSSHGERVV+RLLDKN  RL+L  LGMT  N +
Sbjct: 206 AEKRVPQDGRITLRIAGRAVDVRVSTMPSSHGERVVLRLLDKNNARLNLEDLGMTLQNRN 265

Query: 248 NFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQV 307
           +F  LI++PHGIILVTGPTGSGKSTTLYAGL E+NS +RNILTVEDPIEFD+ GIGQTQV
Sbjct: 266 HFSSLIRKPHGIILVTGPTGSGKSTTLYAGLTEINSRDRNILTVEDPIEFDLPGIGQTQV 325

Query: 308 NPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAV 367
           NPRVDMTFARGLRAILRQDPDVVMVGEIRD+ETAQIAVQASLTGHLV+STLHTNTA GA+
Sbjct: 326 NPRVDMTFARGLRAILRQDPDVVMVGEIRDIETAQIAVQASLTGHLVLSTLHTNTAAGAI 385

Query: 368 TRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYRA 427
           TRL DMGIEPFL+SSSLL VL+QRLVRTLCPDCK+P+  D  + ++          +Y+ 
Sbjct: 386 TRLEDMGIEPFLLSSSLLAVLSQRLVRTLCPDCKKPHSPDASELEILGQNATSDATIYKP 445

Query: 428 TGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVR 487
            GC  CN  GYRGRTGIHELLLVD+ ++E++H   GEQA+E++IR TTPSIR+DG  KV 
Sbjct: 446 HGCAACNQTGYRGRTGIHELLLVDEKVREMMHEGVGEQAIERYIRKTTPSIREDGCSKVL 505

Query: 488 QGITSLEEVMRVTKE 502
            G TSLEEV+RVT+E
Sbjct: 506 AGATSLEEVLRVTRE 520