Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  339 bits (870), Expect = 1e-97
 Identities = 185/455 (40%), Positives = 289/455 (63%), Gaps = 21/455 (4%)

Query: 49  EALVETKRVVKHAFQLIELSQAEFESKLTQVYQRDSSEARQLMEDIGADSDDFFSLAEEL 108
           + L+  +++ ++  +  ++S+A   S+ +  + R +     L++           L +  
Sbjct: 144 QVLLNPEQLQRYLVEYYQVSRAVSSSQKSSTHDRTNKGVEALLQ-----------LGDT- 191

Query: 109 PQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPS 168
            QN D     +D  I+KL++ +L  A ++GASDIH+E  +    IRFR+DGVL  +    
Sbjct: 192 -QNPDA----NDQHIVKLVDWILQFAFEQGASDIHLEPRKDNGKIRFRIDGVLHTIYNMP 246

Query: 169 RKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIG-GRAVDVRVSTMPSSHGERVVMRLL 227
               + ++SR+K++ +L++AEKR PQDGR+  RI  G+  ++R+ST+P++ GE++VMR+ 
Sbjct: 247 ASTLTAVISRLKILGRLNVAEKRKPQDGRLKTRIPKGQETELRLSTLPTAFGEKLVMRIF 306

Query: 228 DKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERN 287
           D          LG      + ++ + +  HGIILVTGPTGSGK+TTLY+ L++L + + N
Sbjct: 307 DPEVLVRSFQQLGFEGRLLNAWQEMTQHSHGIILVTGPTGSGKTTTLYSSLKQLATEQVN 366

Query: 288 ILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQA 347
           + T+EDPIE       Q QVN  +D+ FA G+RA++RQDPD++MVGEIRD +TA +A+QA
Sbjct: 367 VCTIEDPIEMLEPSFNQMQVNHGIDLGFADGVRALMRQDPDIIMVGEIRDQDTANMAIQA 426

Query: 348 SLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEAD 407
           +LTGHLV+STLHTN A  ++TRL D+G++PFL S+++LGVLAQRLVRTLCP CKE  + +
Sbjct: 427 ALTGHLVLSTLHTNDAPSSLTRLHDLGVQPFLTSATILGVLAQRLVRTLCPHCKEKGQIN 486

Query: 408 KEQ--RKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAG-E 464
           + Q     FD   + P  +Y+A GC  C + GY+GR G++E + V  AL++ I  +A  +
Sbjct: 487 EHQWEHLTFDYIMEVPNTVYQAVGCEVCRNTGYKGRIGLYEFMPVSLALKQQISLDASLD 546

Query: 465 QAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRV 499
           Q  ++  +     +R  G  KV  G+T+LEEV+RV
Sbjct: 547 QIRQQAKKEGVEPLRIAGARKVIAGLTTLEEVLRV 581