Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., Type II secretion system protein E from Acinetobacter radioresistens SK82

 Score =  554 bits (1428), Expect = e-162
 Identities = 290/489 (59%), Positives = 370/489 (75%), Gaps = 4/489 (0%)

Query: 16  RLPFSFANRFKLVLDWNEDFSQASIYYLAPLSMEALVETKRVVKHAFQLIELSQAEFESK 75
           ++P+SFA R  ++L +  D  Q  I      +  AL E +R++         S  EF S 
Sbjct: 8   QIPYSFAKRHGVILRYEGD--QVYIMRREDTTPLALQEARRLLGRPVHYQLCSAQEFNSL 65

Query: 76  LTQVYQRDSSEARQLMEDIGADSDDFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAI 135
           L   Y  D+ E++Q+   +  D  D  SLA+++P+ EDL++ EDDAPI++LINA+L EAI
Sbjct: 66  LGSSYAGDTGESQQVAAGL-EDHPDLLSLADQVPEAEDLMDQEDDAPIVRLINALLSEAI 124

Query: 136 KEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQD 195
           + GASDIHIE+FEK LS+R RVDG LRE++ P R+L+ LLVSR+KVMA+LDIAEKR+PQD
Sbjct: 125 RVGASDIHIESFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMARLDIAEKRIPQD 184

Query: 196 GRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKR 255
           GRISLR+ GR VDVRVST+PSSHGERVVMRLLDK A RL++  LG+ A +++  + L+ R
Sbjct: 185 GRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLIAEDYERLKTLVHR 244

Query: 256 PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTF 315
           PHGIILVTGPTGSGK+TTLYA L +LN   RNILT EDPIE+ ++GIGQTQVN +VDMTF
Sbjct: 245 PHGIILVTGPTGSGKTTTLYAALSDLNDGSRNILTAEDPIEYQLEGIGQTQVNTKVDMTF 304

Query: 316 ARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGI 375
           AR L+A+LRQDPDVVMVGEIRDLETA+IAVQASLTGHLV+STLHTNTA+GAVTRL+DMGI
Sbjct: 305 ARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGI 364

Query: 376 EPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDS-KKKEPLILYRATGCPKCN 434
           EPFL+SSSL+GV+AQRLVRTLC  C +  EAD  ++ +F+S ++ EP+ L    GC  C 
Sbjct: 365 EPFLLSSSLIGVVAQRLVRTLCAHCVDWREADSFEQHIFNSFEQIEPVRLPVPKGCEYCA 424

Query: 435 HKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLE 494
           H G+ GRT I+E++ +D+ ++ LIH  A E  +E   R    SIR+DGL KV QG T+LE
Sbjct: 425 HTGFTGRTAIYEIVPIDEQMRRLIHGNAAEYELENFARRHAGSIREDGLRKVLQGKTTLE 484

Query: 495 EVMRVTKES 503
           EV+RVT E+
Sbjct: 485 EVLRVTNEA 493