Pairwise Alignments

Query, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  355 bits (910), Expect = e-102
 Identities = 193/467 (41%), Positives = 296/467 (63%), Gaps = 17/467 (3%)

Query: 45  PLSMEALVETKRVVKHAFQLIELSQAEFESKLTQVYQRDSS---EARQLMEDIGADSDDF 101
           P ++EAL   +   K   +++ +   + +  + Q +  +S+      +L  D+   + D 
Sbjct: 111 PTNIEALEAVRFNSKLNIEVVIVEHDKLQRTIEQNFSEESNFDFGDEELNIDVSTSNLDE 170

Query: 102 FSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVL 161
               +  PQ       E++API+K IN +L +AI+ GASD+H E +EK   +R+RVDGVL
Sbjct: 171 DDSQDNTPQ-------EEEAPIVKYINKLLVDAIRIGASDLHFEPYEKYYRVRYRVDGVL 223

Query: 162 REVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISLRIGG-RAVDVRVSTMPSSHGE 220
           R+V  P  +L++ L SR+KVM+++DI+EKRVPQDGRI L++   +A+D RV+++P+  GE
Sbjct: 224 RQVATPPLQLATRLASRLKVMSQMDISEKRVPQDGRIKLKLSKTKAIDFRVNSLPTLFGE 283

Query: 221 RVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQE 280
           ++V+R+LD ++  L + +LG        F   +++P G++L+TGPTGSGK+ +LY GL  
Sbjct: 284 KLVLRILDPSSAMLGIDALGYEPEQKALFIEALEKPQGMLLITGPTGSGKTVSLYTGLNI 343

Query: 281 LNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLET 340
           LN  + NI T EDP+E +++GI Q  VN +V ++F+  L++ LRQDPD++MVGEIRDLET
Sbjct: 344 LNREDTNISTAEDPVEINLEGINQVNVNNKVGLSFSAALKSFLRQDPDIIMVGEIRDLET 403

Query: 341 AQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDC 400
           A+IA++A+ TGH+VMSTLHTN+A   +TRLR+MG+  F I++S+  V+AQRL R LC  C
Sbjct: 404 AEIAIKAAQTGHMVMSTLHTNSAPETLTRLRNMGVAAFNIATSVNLVIAQRLARRLCNQC 463

Query: 401 KEPYEADK----EQRKLFDSKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQE 456
           K P E  +    E     D        +Y+  GCP+C   GYRGR GI+E++ V   + +
Sbjct: 464 KVPAEIPRNSLLEMGFTEDDLAIPDFQVYQPVGCPEC-RDGYRGRVGIYEVMKVTPEISK 522

Query: 457 LIHSEAGE-QAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRVTKE 502
           +I  +    +      R    ++R  GL KV QG+TSL+E+ RVT E
Sbjct: 523 IIMEDGNALEIAATAARLGFDNLRRSGLKKVMQGVTSLQEINRVTSE 569