Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., type II secretion system F family protein from Rhodanobacter sp000427505 FW510-R12

 Score =  207 bits (526), Expect = 6e-58
 Identities = 123/402 (30%), Positives = 217/402 (53%), Gaps = 9/402 (2%)

Query: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFK 60
           +  +E+ ALD +G+  KG +   NA  V+  L+ Q + P  V E       S   G   K
Sbjct: 25  LTTYEWVALDKRGKRMKGDMPAKNATLVKAELRRQGMNPQTVRERAKPLFGST--GSTIK 82

Query: 61  RGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSD 120
            G    D+A+ +RQ+AT++ SG+P+ +    +A+  +  R + +L+ V+  +  G +L +
Sbjct: 83  PG----DVAIFSRQIATMMASGVPMIQAFDIIADGQKNIRFKNVLIDVKQNIEGGSSLHE 138

Query: 121 SLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVF 180
           +LG YP  FDEL+ ++V AGE SG LD+VL+ +A Y E  + ++ K+++A+ YP++++  
Sbjct: 139 ALGRYPVQFDELYCNLVKAGEASGVLDTVLDTVATYKERTEAIKKKIKKALFYPMMVLAV 198

Query: 181 AVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLVR 240
              +V  +L  VVP     F   G  LPA TQ L+ AS+F+Q +   ++VGL+       
Sbjct: 199 VFIVVLIMLLFVVPVFAKTFQDAGAQLPAPTQLLVTASEFMQSYWF-IVVGLIGGGIAAI 257

Query: 241 WLLTKPDIRLR--WDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDV 298
            +  K  ++     DR  + +PV+G I R    ARFARTL +   + +P+++ M      
Sbjct: 258 VIAKKRSVKFAHFLDRMSLKMPVMGSIVRNSAIARFARTLGVTFRAGVPLVEAMDAVAGA 317

Query: 299 MTNQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADN 358
             +      V    +++  G  L+ A++QT LFP M++ M A GE+SG L+ ML + A+ 
Sbjct: 318 TGSVVYGDAVKQMRDDISVGHQLQLAMKQTGLFPNMVVQMTAIGEESGALDNMLFKVAEF 377

Query: 359 QDNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEM 400
            +    + V+    +  P ++ ++  +V  +V+A  +PI ++
Sbjct: 378 YEEEVSNAVDTLSTLLEPIIMVVLGTLVGGMVVALYLPIFKL 419