Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Type II secretory pathway, component PulF from Kangiella aquimarina DSM 16071

 Score =  198 bits (504), Expect = 2e-55
 Identities = 111/403 (27%), Positives = 217/403 (53%), Gaps = 14/403 (3%)

Query: 4   FEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAF---K 60
           F++  ++ +G+  KG +  +N   V+Q+L +Q + P  +           ++ F+F   K
Sbjct: 22  FQWTGVNKQGQKIKGKMPAENQDIVKQQLLKQGITPKAI----------NAELFSFGGSK 71

Query: 61  RGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSD 120
           + I   D+A+  RQLA ++++G+PL +    + +  E P ++ +++ V+  V  G   ++
Sbjct: 72  KSIKPVDIAVFLRQLAIMMKAGVPLVQSFDIIGKGHENPSVQDLVMDVKQDVESGNPFAE 131

Query: 121 SLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVF 180
           SL  +P  FD+L   ++ AGE+SG L+ +L+R+A Y E  + ++SK++ A++YP  +VV 
Sbjct: 132 SLRKHPKYFDDLVCDLIHAGEQSGTLEQMLDRIATYKEKSEALKSKIKSALMYPAAVVVV 191

Query: 181 AVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFL-QHWGISLLVGLLMLIYLV 239
           ++ + A LL  VVP     F   G  LPA TQ ++D S+ + Q+W + L V + +++   
Sbjct: 192 SIAVTAILLIYVVPMFSQLFEGAGADLPAFTQMVVDMSENVQQYWYLYLFVMIGIVVAYS 251

Query: 240 RWLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVM 299
           +   +    R   D+ ++  P+ G + +    AR+ARTL+   ++ +P++D +  A    
Sbjct: 252 QLNKSSQSFRDGKDKLLLKFPIFGPLIQKAAVARYARTLATTFAAGVPLVDALDSAAGAS 311

Query: 300 TNQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQ 359
            N   +  +    E+V  G  +  A+  T +FP M+  M+A GE+SG ++ ML + AD  
Sbjct: 312 GNAVYRDAIKKIKEDVTTGLQINMAMASTGVFPNMVTQMVAIGEESGAVDTMLAKVADIY 371

Query: 360 DNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNN 402
           +   +  V+    +  P +I  +  +V  +V+A  +P+ +M +
Sbjct: 372 EQEVDDAVDGISSLIEPFVIVFLGTVVGGLVVAMYLPVFQMGS 414