Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., general secretion pathway protein F from Kangiella aquimarina DSM 16071

 Score =  419 bits (1077), Expect = e-122
 Identities = 204/403 (50%), Positives = 300/403 (74%), Gaps = 1/403 (0%)

Query: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVET-QVKAARSRSQGFAF 59
           MAAFEY ALDA+G+ KKGV+E D  RQ+RQ+L+E+ + P+EVV     + AR +S G  F
Sbjct: 1   MAAFEYVALDARGKQKKGVLEADTPRQIRQQLREKDMTPLEVVHIGDAQKAREKSSGGFF 60

Query: 60  KRGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLS 119
           K  I   DLAL+TRQLATLV++ +P+EE L+AVA+Q++K +++++++ VRAKV EG+TL+
Sbjct: 61  KPSIKVADLALVTRQLATLVKAALPIEEALKAVADQTDKGKVKSIILGVRAKVLEGHTLA 120

Query: 120 DSLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVV 179
           D + ++P+VF+EL+RSMVAAGE++GHLD VL RLADY E RQK+ SK+  AM+YPVVL++
Sbjct: 121 DGMAEFPNVFNELYRSMVAAGERAGHLDKVLNRLADYTERRQKINSKVSAAMVYPVVLIL 180

Query: 180 FAVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLV 239
            AVG+V+ L+   VPK+V QF  M Q LP  T+ L+  SDF+ ++G+ +L+ L+++   +
Sbjct: 181 VAVGVVSGLMVFAVPKVVEQFTHMSQELPVLTKILIGISDFVINYGLYVLILLILMFIGM 240

Query: 240 RWLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVM 299
           R+ L   D + RW  +++ +PV G+++  LNTA+F+ TLSI  SS +P+L+ M +   V+
Sbjct: 241 RYWLRNEDNKRRWHAKILKMPVFGRLSSNLNTAQFSSTLSILHSSGVPLLEAMNIGGKVL 300

Query: 300 TNQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQ 359
           +N  ++Q V  AA  VREGSSL+ AL+Q+ LFPPMM+HMI SGE SGELE ML + +DNQ
Sbjct: 301 SNLKMRQAVKEAAIKVREGSSLKVALQQSSLFPPMMIHMIGSGEASGELEQMLQQVSDNQ 360

Query: 360 DNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNN 402
           ++ FE++V++AL I  P +I  + GMV+FIV+A ++PI E+ N
Sbjct: 361 ESLFENSVDVALNIMGPLIILALGGMVMFIVLAMMLPIFELTN 403