Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Type II secretory pathway, component PulF from Enterobacter asburiae PDN3

 Score =  155 bits (393), Expect = 1e-42
 Identities = 90/334 (26%), Positives = 178/334 (53%), Gaps = 6/334 (1%)

Query: 73  RQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSDSLGDYPHVFDEL 132
           RQLATL+Q+G+ L   L+ +AEQ      + +L ++  +++EG   S SL  +P VF  L
Sbjct: 64  RQLATLLQAGLTLSHSLQMLAEQHPLKPWQALLQSIADELSEGSPFSASLKKWPAVFSPL 123

Query: 133 FRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVFAVGIVAFLLAAV 192
             SMV  GE +G L+    +LA   + +Q++R K+++++ YP +++  AV +V  ++  V
Sbjct: 124 HVSMVKTGELTGKLEECCRQLAQQQKAQQQLREKVKKSLRYPAIVLTLAVLVVLAMVILV 183

Query: 193 VPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLVRWLLTKPDIRLRW 252
           +P+    +      LP  TQ ++  + F++ + ++L   LL   +   W L +     RW
Sbjct: 184 LPEFAAIYKTFNTPLPMLTQMVMGMAAFMRSYALALFAALL-APFATAWALRQ---NPRW 239

Query: 253 DRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMTNQFVKQQVLAAA 312
            R ++ +PV+G +A+G         LS+   + IP L G+  A + + + + +  +    
Sbjct: 240 QRMLMHMPVMGALAKGQKLGHIFTVLSLTQQAGIPFLQGLESAEETVESCYWRGILCCVR 299

Query: 313 ENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTR-AADNQDNSFESTVNIAL 371
           E++ +G  +  + ++  +F P+ + ++ +GE SG L+ ML   A  + + +F+   N+A 
Sbjct: 300 EDIEKGLPVWSSFQKAAIFTPLCIQLLRTGEMSGALDIMLANLARHHTEQTFQRADNLA- 358

Query: 372 GIFTPALIALMAGMVLFIVMATLMPILEMNNLMS 405
            +  P L+ +   ++  +V+A  +PI  + + MS
Sbjct: 359 ALLEPVLLIVTGVIIGTLVVAMYLPIFHLGDAMS 392