Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., type II secretion system protein F from Enterobacter asburiae PDN3

 Score =  346 bits (887), Expect = e-100
 Identities = 171/404 (42%), Positives = 273/404 (67%), Gaps = 3/404 (0%)

Query: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFK 60
           MA + + A DA G+ ++G ++ +  +QVRQ L+EQ L+P+ +  T   +A   ++  A  
Sbjct: 1   MAWYAWSATDAAGKTQRGTLQAEGPKQVRQMLREQKLMPVNIAPTSDPSAGKNARKGA-- 58

Query: 61  RGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSD 120
             +S P L++ TRQLATLV + +PLE  L+A+A+Q+E   +  M+  +R K+ EG+TL D
Sbjct: 59  -KLSIPVLSMFTRQLATLVNAALPLESALKAIAKQTEDKTLAAMVSEIRDKIVEGHTLFD 117

Query: 121 SLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVF 180
           +   +P  FD+L+ ++V AGEK+GHL  VLE+LA+Y E RQKM+SKL QAM+YP+ L V 
Sbjct: 118 AFSQFPRSFDKLYCTLVMAGEKTGHLGGVLEKLAEYNEQRQKMKSKLTQAMVYPITLTVV 177

Query: 181 AVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLVR 240
           A+ +++ LL AVVP+++ QF  M Q LP +T+ L+  SDFLQ WGI +  GL       +
Sbjct: 178 AIAVISILLVAVVPQVIDQFTHMKQELPVTTRTLIAVSDFLQAWGIVIAGGLFGASASFK 237

Query: 241 WLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMT 300
           + +     R  + R ++    + K+   +N+AR+ RTLSI  +S++P+L+GM +A+D + 
Sbjct: 238 FWIKVEKNRFVYHRWLLLKSPLKKLVCAINSARYIRTLSILQASSVPLLEGMYIAMDGIE 297

Query: 301 NQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQD 360
           N + +Q +  AA+ VR+G+SL  ALEQ ++FPP ML+M+ASGE+SGEL  ++ RAA+NQ+
Sbjct: 298 NLYARQVLEQAADTVRQGASLYNALEQARIFPPTMLYMVASGEESGELGSLMDRAAENQE 357

Query: 361 NSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNNLM 404
           ++ +  + + L +F PAL+  MA +VLFIV++ L P+L++NN++
Sbjct: 358 SALQHRITLTLSVFEPALVVTMATVVLFIVLSILQPLLQLNNMV 401