Pairwise Alignments

Query, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., general secretion pathway protein F from Dickeya dianthicola ME23

 Score =  262 bits (669), Expect = 2e-74
 Identities = 152/402 (37%), Positives = 246/402 (61%), Gaps = 3/402 (0%)

Query: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFK 60
           M  F Y A++ +G    G     +   +R++L  + L+   +V  +V   +      +  
Sbjct: 1   MRNFRYIAVNTEGELVTGRHRAFSKESLREQLFARQLI---MVSCRVSLLQQWLLLLSRH 57

Query: 61  RGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSD 120
             +ST DLAL+TRQLA+L+++G+PLEE L  +A Q++K  +  +L AVR ++  G + + 
Sbjct: 58  ERLSTLDLALLTRQLASLLEAGIPLEEALTTLASQADKHAVGAVLNAVREQLIAGLSFAQ 117

Query: 121 SLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVF 180
           +L   P+ F+ L+ +MVAAGE +G L  VL RLADY +  QK ++ L QA++YPV+L V 
Sbjct: 118 ALQTLPYNFNRLYCAMVAAGEATGCLALVLIRLADYLDQHQKTKNALIQALLYPVLLAVM 177

Query: 181 AVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLVR 240
           +V +V+ LL++VVP++V Q  Q    LP +T+ LL  SD L H+G  L V L  L   + 
Sbjct: 178 SVIVVSILLSSVVPQVVMQLQQTHTPLPLTTRTLLAISDVLNHYGWMLPVALAALAVGLH 237

Query: 241 WLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMT 300
            ++  P  +L  DR ++ L  +G + R +++AR+ RT+ I  +SAIP+L+ M VA +V+ 
Sbjct: 238 QIVRIPARKLWLDRHLLRLYAVGPLLRDISSARYIRTMEILIASAIPLLESMSVAENVLN 297

Query: 301 NQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQD 360
           N F + Q+  A++ V EG SL ++L    +F  M+ HMIASGE+SG LE ML   AD Q+
Sbjct: 298 NSFARFQLTVASQKVNEGKSLTESLSNNDIFSGMVKHMIASGERSGRLEPMLKYIADIQE 357

Query: 361 NSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNN 402
            S +  +++ L +    L+ +++ +VLFIVM+ L PI++++N
Sbjct: 358 ESLKRRISLLLLLGENGLLIIISSLVLFIVMSILQPIMQLSN 399