Pairwise Alignments

Query, 146 a.a., type II secretion system protein GspG from Vibrio cholerae E7946 ATCC 55056

Subject, 145 a.a., pseudopilin, cryptic, general secretion pathway (NCBI) from Escherichia coli BW25113

 Score =  184 bits (466), Expect = 6e-52
 Identities = 92/143 (64%), Positives = 110/143 (76%), Gaps = 4/143 (2%)

Query: 1   MKKMRKQTGFTLLEVMVVVVILGILASFVVPNLLGNKEKADQQKAVTDIVALENALDMYK 60
           M+   KQ GFTLLE+MVV+VI+G+LAS VVPNL+GNKEKAD+QKAV+DIVALENALDMYK
Sbjct: 1   MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYK 60

Query: 61  LDNSVYPTTDQGLEALVTKPTNPE-PRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDV 119
           LDN  YPTT+QGLE+LV  PT P    NY + GYIKRLP DPWGNDY  ++PG+ G  D+
Sbjct: 61  LDNHHYPTTNQGLESLVEAPTLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDL 120

Query: 120 FTLGADGQEGGEGTGADIGNWNI 142
            + G DG+ G E    DI NW +
Sbjct: 121 LSAGPDGEMGTED---DITNWGL 140