Pairwise Alignments

Query, 146 a.a., type II secretion system protein GspG from Vibrio cholerae E7946 ATCC 55056

Subject, 145 a.a., pseudopilin, cryptic, general secretion pathway from Escherichia coli BL21

 Score =  184 bits (466), Expect = 6e-52
 Identities = 92/143 (64%), Positives = 110/143 (76%), Gaps = 4/143 (2%)

Query: 1   MKKMRKQTGFTLLEVMVVVVILGILASFVVPNLLGNKEKADQQKAVTDIVALENALDMYK 60
           M+   KQ GFTLLE+MVV+VI+G+LAS VVPNL+GNKEKAD+QKAV+DIVALENALDMYK
Sbjct: 1   MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYK 60

Query: 61  LDNSVYPTTDQGLEALVTKPTNPE-PRNYREGGYIKRLPKDPWGNDYQYLSPGDKGTIDV 119
           LDN  YPTT+QGLE+LV  PT P    NY + GYIKRLP DPWGNDY  ++PG+ G  D+
Sbjct: 61  LDNHHYPTTNQGLESLVEAPTLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDL 120

Query: 120 FTLGADGQEGGEGTGADIGNWNI 142
            + G DG+ G E    DI NW +
Sbjct: 121 LSAGPDGEMGTED---DITNWGL 140