Pairwise Alignments

Query, 194 a.a., type II secretion system protein H from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., general secretion pathway protein H from Kangiella aquimarina DSM 16071

 Score = 64.3 bits (155), Expect = 1e-15
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 17/183 (9%)

Query: 6   GFTLLEILLVLVLVSASAVAVIATFPVSVKDEAKI--SAQSFYQRLLLLNEEAILSGQDF 63
           GFTLLEIL+ L +  AS +  +A    S  D AK+   A   Y  + +  EE+IL G + 
Sbjct: 22  GFTLLEILIALAI--ASIMLSVAVIAFSDNDAAKLKNKAHQLYGLMQIAQEESILRGVEI 79

Query: 64  GVRIDVDTRRLTFLQLTADKGWQKWQNDKMTNQTTLKEGLQLDFELGGGAWQKDDRLFNP 123
           G+R+  D         T    W   Q   +     L+E +++   + G    ++  L N 
Sbjct: 80  GIRVKQDGYSFLIYDGTR---WNPLQEHTLLRDVELEEPIEMYVNVEG----QEALLAN- 131

Query: 124 GSLFDEEMFADEKKEQ---KQEPAPQLFVLSSGEVTPFTLSIFPKGQEPDEQWRVTAQEN 180
            S  D+E   ++  +Q   K+   PQ+F+LSSGE+  FT++I     EP + +R+T    
Sbjct: 132 -SEADDESVEEQDGDQDANKEIKPPQIFMLSSGEMNEFTVTIGLDRDEP-KFYRITGNYL 189

Query: 181 GTL 183
           G +
Sbjct: 190 GEI 192