Pairwise Alignments

Query, 194 a.a., type II secretion system protein H from Vibrio cholerae E7946 ATCC 55056

Subject, 161 a.a., type II secretion system protein H from Enterobacter asburiae PDN3

 Score = 45.4 bits (106), Expect = 5e-10
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 38/183 (20%)

Query: 1   MTATRGFTLLEILLVLVLVSASAVAVIATFPVSVKDEAKISAQSFYQRLLLL----NEEA 56
           M   RGFTLLEI++ LV+ + SA+ V+ T P      ++  A +F Q+L  L    ++ A
Sbjct: 1   MNKQRGFTLLEIIVALVIFALSAMMVVTTIP------SRSGADTFGQQLKSLVEYGSDRA 54

Query: 57  ILSGQDFG-VRIDVDTRRLTFLQLTADKGWQKWQNDKMTNQTTLKEGLQLDFELGGGAWQ 115
           ++ G   G V    +   +T +    ++ W   ++ ++  +    E + +       A  
Sbjct: 55  VMDGNIVGLVMTSSEFELVTQVGNNGERHWAPLKSGRIATRGEFPEEMHVSLSSRTLAAT 114

Query: 116 KDDRLFNPGSLFDEEMFADEKKEQKQEPAPQLFVLSSGEVTPFTLSIFPKGQEPDEQWRV 175
            DD                          PQ+  L  GE++ FTLS+  +  +  +++ V
Sbjct: 115 LDDE-------------------------PQIIFLPDGELSRFTLSL--ESLDKKQRFHV 147

Query: 176 TAQ 178
           T+Q
Sbjct: 148 TSQ 150