Pairwise Alignments

Query, 194 a.a., type II secretion system protein H from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., General secretion pathway protein H from Alteromonas macleodii MIT1002

 Score = 99.0 bits (245), Expect = 5e-26
 Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 8/172 (4%)

Query: 6   GFTLLEILLVLVLVS-ASAVAVIATFPVSVKDEAKISAQSFYQRLLLLNEEAILSGQDFG 64
           GFTLLE++LVL+L+  A+   +   F  S  D  K  AQ     + + ++ A+L+ Q  G
Sbjct: 13  GFTLLEVMLVLLLMGLAAGYVMFNAFGASKSDLLKTQAQRLQVIVDMASDFAVLNQQQLG 72

Query: 65  VRIDVDTRRLTFLQLTADKGWQKWQNDKMTNQTTLKEGLQLDFELGGGAWQKDDRLFNPG 124
           VR + D     F+ L  D  WQ+ + +K     TL E       L    W  +DRLF+  
Sbjct: 73  VRFEADKNEYYFVYLDDDDEWQRIEGEKTYEPYTLPEPFTFTLNLDDLPWDVEDRLFD-R 131

Query: 125 SLFDEEMFADEK------KEQKQEPAPQLFVLSSGEVTPFTLSIFPKGQEPD 170
            LFDE +   ++      +E+K+ P PQ+ ++SSGE+TPFTLS   +G + D
Sbjct: 132 ELFDENLSVSDEGVEIGNEEEKKLPPPQVLIMSSGEITPFTLSFNYEGDDGD 183