Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 125 a.a., putative export protein for general secretion pathway (GSP) (VIMSS) from Escherichia coli BW25113

 Score = 54.7 bits (130), Expect = 4e-13
 Identities = 29/110 (26%), Positives = 51/110 (46%)

Query: 1   MKSKRGFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLN 60
           M  + G TLLEVL+A++IF   A++++ S+    N +  +  +  A  + DNQ+      
Sbjct: 1   MNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRNAIERMRNETLALWIADNQLQSQDSF 60

Query: 61  PQSLAAREGSEQMAGRTWYWKLSPVKTADNLLKAFDVSVATEKGATPVVT 110
            +   +  G E + G  W W+     + D  L    ++V    G T  +T
Sbjct: 61  GEENTSSSGKELINGEEWNWRSDIHSSKDGTLLERTITVTLPSGQTTSLT 110