Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 121 a.a., type II secretion system minor pseudopilin GspI from Escherichia coli ECRC101

 Score = 57.0 bits (136), Expect = 8e-14
 Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 5/119 (4%)

Query: 1   MKSKRGFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLN 60
           +K + G TLLEV+VAL +FA A ++++++ +Q    +  +EEK+ A  + DNQM Q+ L 
Sbjct: 1   VKGQEGMTLLEVIVALVVFALAGMALMQASTQQAAGIGRMEEKVLAGWLADNQMVQLQLE 60

Query: 61  ---PQSLAAREGSEQMAGRTWYWKLSPVKTADNLLKAFDVSV-ATEKGATPVVTVRSYV 115
              P++    E +   AG  WY +     +     ++ +V V  T++  + +V++RS V
Sbjct: 61  KTWPEN-GWGEKTISFAGTEWYLRWGGPDSDVPQPRSLEVEVRRTKEETSALVSLRSSV 118