Pairwise Alignments

Query, 117 a.a., type II secretion system protein GspI from Vibrio cholerae E7946 ATCC 55056

Subject, 123 a.a., putative type II secretion protein GspI from Escherichia coli BL21

 Score = 90.1 bits (222), Expect = 8e-24
 Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 4   KRGFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMA--QVMLNP 61
           KRGFTLLEV++ALAIFA AA +V++  S  ++  + LEEK  A  V +NQ A   +M   
Sbjct: 2   KRGFTLLEVMLALAIFALAATAVLQIASGALSNQHVLEEKTVAGWVAENQTALLYLMTRE 61

Query: 62  QSLAAREGSEQMAGRTWYWKLSPVKTADNLLKAFDVSVATEKGATPVVTVR 112
           Q     +G   MAG  WYW+ +P+ T + LL+A D+ V+  +  +PV+  R
Sbjct: 62  QRAVRHQGESDMAGSRWYWRTTPLSTGNALLQAVDIEVSLHEDFSPVIQSR 112