Pairwise Alignments

Query, 221 a.a., type II secretion system protein GspJ from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., type II secretion system minor pseudopilin GspJ from Dickeya dianthicola ME23

 Score =  138 bits (347), Expect = 1e-37
 Identities = 76/191 (39%), Positives = 118/191 (61%), Gaps = 5/191 (2%)

Query: 14  AGFTLIEVLVAIAIFASLSVGAYQVLNQVQRSNEISAERTARLAELQRAMVIMDADFRQM 73
           +GFTL+EV++A+AIFA+LS+ A QV+N V R++E SA + ARLAELQR   +M+ DF Q+
Sbjct: 6   SGFTLLEVMLALAIFAALSLAASQVMNGVMRNDEASARKEARLAELQRGFSLMERDFSQI 65

Query: 74  ALRQFRTDGEAPSEQILQWKESLLDSDQHGLLFVRLGWHNPQQQFPRGEVAKVGYRLFEN 133
             R  R+ G        +++   L S    + F+R GW NP    PR E+ +VGYRL  +
Sbjct: 66  VPR--RSQGYELGFYAERYQ---LSSADWAVSFIRNGWLNPLGIMPRSELQRVGYRLRGD 120

Query: 134 RLERVWWRYPDTPAGQQGLISPLLTGVEDWAVQFYLQGEWSKEWVPTNALPEAVKVTLRL 193
            LER+++   +  + Q+  I P+LTGV  + ++F+ +  W   W     LP+ + + + L
Sbjct: 121 TLERLFYDSSEPLSTQEAAIRPVLTGVTGFVLRFFGKDGWQDRWDDPAHLPQGMAIVVTL 180

Query: 194 KDYGEIERIYL 204
           +DYGEI R++L
Sbjct: 181 RDYGEITRVFL 191