Pairwise Alignments

Query, 221 a.a., type II secretion system protein GspJ from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., type II secretion system minor pseudopilin GspJ from Dickeya dadantii 3937

 Score =  138 bits (348), Expect = 8e-38
 Identities = 77/190 (40%), Positives = 118/190 (62%), Gaps = 5/190 (2%)

Query: 15  GFTLIEVLVAIAIFASLSVGAYQVLNQVQRSNEISAERTARLAELQRAMVIMDADFRQMA 74
           GFTL+EV++A+AIFA+LS+ A QV+N V R++E SA + ARLAELQRA  +M+ DF Q+ 
Sbjct: 7   GFTLLEVMLALAIFAALSLAASQVMNGVMRNDEASARKEARLAELQRAFSLMERDFSQIV 66

Query: 75  LRQFRTDGEAPSEQILQWKESLLDSDQHGLLFVRLGWHNPQQQFPRGEVAKVGYRLFENR 134
            R  R+ G        +++   L S    + F+R GW NP    PR E+ +VGYRL  + 
Sbjct: 67  PR--RSQGYELGFYAERYQ---LSSADWAVSFIRNGWLNPLGIMPRSELQRVGYRLRGDT 121

Query: 135 LERVWWRYPDTPAGQQGLISPLLTGVEDWAVQFYLQGEWSKEWVPTNALPEAVKVTLRLK 194
           LER+++   +  + Q+  I P+LTGV  + ++F+ +  W   W     LP+ + + + L+
Sbjct: 122 LERLFYDSSEPLSTQEPAIRPVLTGVTGFVLRFFGKDGWLDRWDDPAHLPQGIAIVVTLR 181

Query: 195 DYGEIERIYL 204
           DYGEI R++L
Sbjct: 182 DYGEITRVFL 191