Pairwise Alignments

Query, 221 a.a., type II secretion system protein GspJ from Vibrio cholerae E7946 ATCC 55056

Subject, 181 a.a., prepilin-type N-terminal cleavage/methylation domain-containing protein from Dickeya dadantii 3937

 Score = 66.2 bits (160), Expect = 4e-16
 Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 24/200 (12%)

Query: 10  RQNMAGFTLIEVLVAIAIFASLSVGAYQVLNQVQRSNEISAERTARLAELQRAMVIMDAD 69
           RQ   GFTL+EVLV+IA+ A L V A  +L  +   ++    +   +  L   M  M  D
Sbjct: 2   RQTQKGFTLLEVLVSIAVAAVLLVSAIFILRGLNSGSQRLRLQQQHITMLLTGMQQMHQD 61

Query: 70  FRQMALRQFRTDGEAPSEQILQWKESLLDSDQHGLLFVRLGWHNPQQQFPRGEVAKVGYR 129
              +    F+  G      +L + E L  S    L F  L      Q   R  + ++ +R
Sbjct: 62  LANLV--PFKRAG----GNLLLFAEPLDGSQLRALTFSSL------QPSYRTSIVRIAWR 109

Query: 130 LFENRLERVWWRYPDTPAGQQGLISPLLTGVEDWAVQFYLQGEWSKE--WVPTNALPEAV 187
           L    + R     P   A        +LTGV+ W+++FY QG W     W P    P A+
Sbjct: 110 LQNGVIYRQTSLAPQWQA--------ILTGVQGWSLRFYQQGSWQNATGWQPLP--PSAI 159

Query: 188 KVTLRLKDYGEIERIYLTGG 207
           ++T+ L D G  +R+ L  G
Sbjct: 160 ELTVTLSDLGTYQRLILLRG 179