Pairwise Alignments

Query, 221 a.a., type II secretion system protein GspJ from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Type II secretion system protein J from Acinetobacter radioresistens SK82

 Score = 46.6 bits (109), Expect = 4e-10
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 13/208 (6%)

Query: 15  GFTLIEVLVAIAIFASLSVGAYQVLNQVQRSNEISAERTARLAELQRAMVIMDADFRQMA 74
           GFTL+E+LVAIAIFA+LS   ++V + + +  E ++     LA LQ A   +  D  Q+ 
Sbjct: 6   GFTLVELLVAIAIFAALSALGWKVFDYLIKVKERNSIHEQNLARLQEAYQQILRDSLQLI 65

Query: 75  LRQFRTDGEAPSEQILQWKESLLDSDQHGLLFVRLGWHNP-QQQFPRGEVAKVGYRLFEN 133
                  GE         + +L  +DQH  +F + G  +P  Q     E  +  Y   + 
Sbjct: 66  PLTANNGGEL--------RPALELNDQH-FIFSKAGVTDPLGQGLGPYERIEYQYSSADQ 116

Query: 134 RLERVWWRYPDTPAGQQGLISPLLTGVEDWAVQFYLQGEWSKEWVPTNALPEAVKVTLRL 193
           +L R+ ++  +T    Q   S LL  VE + +      E ++ W      P +    L++
Sbjct: 117 KLYRLKYQNLNTSTAIQPQSSVLLDQVEQYRISVLNPAELNR-WPEGVLNPASQSEQLKI 175

Query: 194 KDYGEIERIYLTGGGSLNMTQESVENAG 221
              G   +I LT  G+      S+ N G
Sbjct: 176 LPRG--FKINLTINGTEYEWIYSLSNTG 201