Pairwise Alignments

Query, 336 a.a., type II secretion system protein K from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., General secretion pathway protein K from Sphingobium sp. HT1-2

 Score =  132 bits (331), Expect = 2e-35
 Identities = 102/326 (31%), Positives = 161/326 (49%), Gaps = 8/326 (2%)

Query: 2   RAKQRGVALIVILLLLAVMVSIAATMAER--LFSQFQRATHQLNYQQAYWYSLGVEALAK 59
           R ++RG AL+ +LLL+AVM  +AAT  ER  L ++       ++  +A+  +  V A  K
Sbjct: 8   RPEERGAALLTVLLLVAVMAVVAATALERVALATRMTGNGGAVDQGRAFADAGMVIARLK 67

Query: 60  KGIEQSYQDSETINLSQPWALKEQTYPLDYGQVRGKIRDMQACFNLNALAGVKLTPDSVK 119
            G   +    +T  L+  W    Q  P+  G    ++ D   CFNLN++           
Sbjct: 68  IGDLVAASPGKT-TLAGNWMGTPQAIPVPGGMATARVTDGSNCFNLNSVVAGNNENSLKV 126

Query: 120 KPYLLTVLQALLEGLEVESYQAEVIADSTLEFIDKDDSVRTAYGVEDSYYESMIPAYMAA 179
           +P  ++  QALL+ L V+  QA+V A S  ++ID  DSV    G ED  Y      Y  A
Sbjct: 127 RPVAVSQFQALLQALGVDVRQAQVAAASLADWID-TDSVPQPAGAEDETYARAARPYRTA 185

Query: 180 DTWLADASEWRAVQQVGGETMNKALPYVCALP-TDQWRLNVNTLPAEQAALLAAMFSPTL 238
           + ++ DASE RAV  +     +   P+VCALP +D   +N+NTL  +QA L A +    L
Sbjct: 186 NRFMVDASELRAVNGITPAVYDLVRPWVCALPVSDMSPININTLLPDQAPLFAMLLPGQL 245

Query: 239 SPESAKTLLEGRPFDGWASVDDFLAQSALTGVDNAVREEAKKYLSVDSHYFELDAQVLVD 298
           S   A+ LL  RP +G+ S+  F    +L G+      E  + + + + +F +D  V V 
Sbjct: 246 SVAQARQLLAQRPAEGYGSIPQFWQAPSLVGLSPLT--EVAEQVKLTTGFFRVDVSVNVG 303

Query: 299 TSRVRIRSLFYSNDKKTATVIRRRFG 324
            ++V  R L  +  +    ++RR +G
Sbjct: 304 GTQVVERGLIDAR-QPPIRLVRRDWG 328