Pairwise Alignments

Query, 336 a.a., type II secretion system protein K from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., general secretory pathway component, cryptic (NCBI) from Escherichia coli BW25113

 Score =  167 bits (422), Expect = 4e-46
 Identities = 113/327 (34%), Positives = 172/327 (52%), Gaps = 10/327 (3%)

Query: 1   MRAKQRGVALIVILLLLAVMVSIAATMAERLFSQFQRATHQLNYQQAYWYSLGV-EALAK 59
           M  +QRGVAL+++L+LLA+M ++AA M     SQ QR T Q+N+     Y + + E LA 
Sbjct: 1   MNNEQRGVALLIVLMLLALMAALAADMTLSFHSQLQR-TRQVNHHLQRQYDIELAEKLAL 59

Query: 60  KGIEQSYQDSET-INLSQPWALKEQTYPLDYGQVRGKIRDMQACFNLNALAGVKLTPDSV 118
             + Q  +D++    L Q WA  +Q    D   V+ ++RD Q CFNLNALA  K++ D +
Sbjct: 60  ASLTQDVKDNDRQTTLQQYWAQPQQLQLEDGNTVKWQLRDAQHCFNLNALA--KISDDPL 117

Query: 119 KKP-YLLTVLQALLEGLEVESYQAEVIADSTLEFIDKDDSVRTAYGVEDSYYESMIPAYM 177
             P +   V  ALL    ++    + I  S  ++ID DDS R  +G EDS+Y+S  P   
Sbjct: 118 ASPDFPAQVFSALLINAGIDRGNTDEIVQSIADYIDVDDSPRF-HGAEDSFYQSQTPPRH 176

Query: 178 AADTWLADASEWRAVQQVGGETMNKALPYVCALPTDQWRLNVNTLPAEQAALLAAMFSPT 237
           +A+  L    E R ++ +      + +PYVC LPT +  +N+N L      L  A+F   
Sbjct: 177 SANQMLFLTGELRQIKGITENIYQRLIPYVCVLPTTELSINLNMLTENDIPLFRALFLNN 236

Query: 238 LSPESAKTLLEGRPFDGWASVDDFL--AQSALTGVDNAVREEAKKYLSVDSHYFELDAQV 295
           ++   A+ LL+ RP +GW + D FL  AQ   +GV   V  + K++L   S YF L  + 
Sbjct: 237 ITDADARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLV-AQVKRHLFPYSRYFTLSTES 295

Query: 296 LVDTSRVRIRSLFYSNDKKTATVIRRR 322
           + D      +S  + N K+ +  I RR
Sbjct: 296 ISDEQSQGWQSHIFFNRKQQSAQIYRR 322