Pairwise Alignments

Query, 336 a.a., type II secretion system protein K from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., Type II secretory pathway, component PulK from Kangiella aquimarina DSM 16071

 Score =  129 bits (325), Expect = 9e-35
 Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 34/346 (9%)

Query: 3   AKQRGVALIVILLLLAVMVSIAATMAERLFSQFQRATHQLNYQQAYWYSLGVEALAKKGI 62
           +KQ G+ALI +L++ +V+  +A  +        QR  + +N  +AY Y  G E  AK  +
Sbjct: 18  SKQSGIALITVLVIFSVLSIMAIHILSNQHMNNQRTANIINSSRAYQYMYGAEEFAKSLL 77

Query: 63  EQSYQDS--ETINLSQPWALKEQTYPLDY--GQVRGKIRDMQACFNLNAL---------- 108
           +  +++S  E ++ +QPWA     +P++   GQ+ G +RDM +CFNLN++          
Sbjct: 78  QNYFEESDQERVHRNQPWAQNPMMFPIEQNMGQLEGSVRDMHSCFNLNSIIMEPVVQAGS 137

Query: 109 ---------AGVKLTPDS-----VKKPYLLTVLQALLEGLEVESYQAEVIADSTLEFIDK 154
                     G+++  ++      + P      + +   +E      + +A +  ++ID 
Sbjct: 138 EDSERGNGGGGLQVVGETGGQTDEQLPGQKLFAKLIEPLIEQSESSPQALAAAVRDWIDD 197

Query: 155 DDSVRTAYGVEDSYYESMIPAYMAADTWLADASEWRAVQQVGGETMNKALPYVCALPTDQ 214
           D       G ED  Y  +   Y  A+T++A  SE   V+       +    Y+C LPT+Q
Sbjct: 198 DLEPAGIDGAEDYTYTGLTKPYRTANTFMAHTSELMVVKGFNAAIYDSIKDYICVLPTEQ 257

Query: 215 WRLNVNTLPAEQAALLAAMFSPTLSPESAKTLLEGRPFDGWASVDDFLAQSALTGVDNAV 274
             +NVNT+  EQA L+  +    +   + +  LE  P DG+     F +  +       V
Sbjct: 258 GTINVNTVKPEQAELVWILLE-DVDLATVRQALEQLPEDGYDEASFFESLGS-----GKV 311

Query: 275 REEAKKYLSVDSHYFELDAQVLVDTSRVRIRSLFYSNDKKTATVIR 320
            ++ +  L  DS Y +L A  +V + R +++SL   ++ K   V R
Sbjct: 312 SKDGRGRLVFDSQYMQLTATAMVQSGRAKVQSLLMKSENKFQVVAR 357