Pairwise Alignments

Query, 336 a.a., type II secretion system protein K from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Type II secretory pathway, component PulK from Enterobacter asburiae PDN3

 Score =  124 bits (311), Expect = 3e-33
 Identities = 93/330 (28%), Positives = 163/330 (49%), Gaps = 15/330 (4%)

Query: 4   KQRGVALIVILLLLAVMVSIAATMAERLFSQFQRATHQLNYQQAYWYSLGVEALAKKGIE 63
           K+RGVAL+V+L+LL +M ++AA ++++     Q+  +Q++ Q   W ++  +    + + 
Sbjct: 8   KERGVALLVVLILLVMMSALAAKISQQFCRHLQKTHYQVSQQTLRW-AIARQQKVLENVL 66

Query: 64  QSYQDSETINLSQP--WALKEQTYPLDYGQVRGKIRDMQACFNLNALAGVKLTPDSV--- 118
           Q    SE   LS    WA   +T   +Y  V  ++ D + CFN+N+L      P +    
Sbjct: 67  QKAASSEGAGLSPQGDWAQPLKTQGDNYTVV-SQVEDARTCFNVNSLLAGDAAPAAPADA 125

Query: 119 ----KKPYLLTVLQALLEGLEVESYQAEVIADSTLEFIDKDDSVRTAYGVEDSYYESMIP 174
               +KP    +++ LL    V +  AE I    ++++D DD V    G E   + S+ P
Sbjct: 126 TALPEKPVKEQIIEQLLTESGVGTLAAEEIYQQLVDYLDADD-VTAKQGQEADAWASVTP 184

Query: 175 AYMAADTWLADASEWRAVQQVGGETMNKALPYVCALPTDQWRLNVNTLPAEQAALLAAMF 234
           A   A+  +   +E R +         K    +CALP     +NVNTL  EQA LLAA+F
Sbjct: 185 ARGPANQMMRTINEIRVLPAFPQAAWPKVSKLLCALPDTDGTINVNTLTREQAPLLAAVF 244

Query: 235 SPTLSPESAKTLLEGRPFDGWASVDDF--LAQSALTGVDNAVREEAKKYLSVDSHYFELD 292
           +  L+ + A  L++ RP +GWAS++ F  + +S      + +  + +  ++V+S YF +D
Sbjct: 245 TGVLNTDDAARLIDSRPEEGWASLEAFSKVLESNYPQTKD-ILAQIQDRVAVNSRYFRVD 303

Query: 293 AQVLVDTSRVRIRSLFYSNDKKTATVIRRR 322
                D   +R+ S  + + +    V  +R
Sbjct: 304 TTGNTDDLTLRVVSQLHVDSEAGKVVTWQR 333