Pairwise Alignments

Query, 336 a.a., type II secretion system protein K from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., type II secretion system minor pseudopilin GspK from Dickeya dianthicola ME23

 Score =  186 bits (473), Expect = 6e-52
 Identities = 126/363 (34%), Positives = 188/363 (51%), Gaps = 48/363 (13%)

Query: 1   MRAKQRGVALIVILLLLAVMVSIAATMAERLFSQFQRATHQLNYQQAYWYSLGVEALAKK 60
           M  +QRGVAL++++L+LA+MV+IAAT+ ER    +QR ++ LN  QA WY+LG EAL   
Sbjct: 1   MSRRQRGVALLIVMLMLALMVTIAATITERSGKAWQRTSNLLNRTQARWYALGAEALISS 60

Query: 61  GIEQSYQDS-ETINLSQPWALKEQTYPLDYGQVRGKIRDMQACFNLNALAGVKL------ 113
            +++  Q S E+  + QPW+  +     D  ++R ++ D QAC NLNAL+  K       
Sbjct: 61  VLQRDAQASPESTFVGQPWSKVDHQMMADGSEIRAQVMDGQACLNLNALSPAKTPAPNTA 120

Query: 114 ------------------------TPDSVKK-------PYLLTVLQALLEGLEVESYQAE 142
                                    P    K       PY   V + LL  L  +  QAE
Sbjct: 121 SGNNNTGNTNTDNTNTGTSNTGTNNPSPPSKGGNPEQGPYAAQVFRQLLMVLGEDPKQAE 180

Query: 143 VIADSTLEFIDKDDSVRTAYGVEDSYYESMIPAYMAADTWLADASEWRAVQQVGGETMNK 202
            + D+  +++D +DS     G ED  Y +  P        + D +E R+V  V      +
Sbjct: 181 RVTDAVRDWLD-EDSEPLMNGAEDDSYVNFHPGNQR----MTDVTELRSVMGVDAALYRR 235

Query: 203 ALPYVCALPTDQWRLNVNTLPAEQAALLAAMFSPTLSPESAKTLLEGRPFDGWASVDDFL 262
            LPYVC LP D+  LNVNTL  E A LL+A+F   +S E A+ +L+ RP  GW +++DF+
Sbjct: 236 LLPYVCVLPVDKLVLNVNTLTPESAPLLSALFMGEMSTEMAERVLQQRPPQGWRNLNDFM 295

Query: 263 AQSALTGVDNAVREEAKKYLSVDSHYFELDAQVLVDTSRVRIRSLFYSNDKKTATVIRRR 322
             SAL   +NA +   ++ L++ S +F  D Q+ VD S    RSLF+    K   V++R+
Sbjct: 296 GLSALP--ENA-KTGIRQVLAIKSDWFFADIQIRVDDSEFYQRSLFHRG--KQIEVVQRQ 350

Query: 323 FGG 325
           +GG
Sbjct: 351 YGG 353