Pairwise Alignments

Query, 166 a.a., general secretion pathway protein GspM from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., GspM family type II secretion system protein YghD from Escherichia coli ECRC62

 Score = 81.6 bits (200), Expect = 6e-21
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 17  TPREQKMVMGMGALTVLAIAYWGIWQPLSERTAQAQARLQTEKQLLSWVSENANDIVTLR 76
           +PRE+ M++           Y  IWQPLSER  Q +  LQ    + + +   A DI+  R
Sbjct: 33  SPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTRLRSAAPDIMAAR 92

Query: 77  AQGGSDAPSDQPLNQVITNSTRQFNIELIRVQPRGEMMQVWIQPLPFSQLVSWIAYLQER 136
               S   +   +++VI++S    ++ + R+  RGE +QVWI P+ F+ L++W+  L E+
Sbjct: 93  K---SATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEK 149

Query: 137 QGVSVDAIDIDRGKVNGVVEVKRLQLKRG 165
             + V  ID    +  G+V V+RL+  RG
Sbjct: 150 YALRVTQIDASAAEKTGMVNVQRLEFGRG 178