Pairwise Alignments

Query, 166 a.a., general secretion pathway protein GspM from Vibrio cholerae E7946 ATCC 55056

Subject, 170 a.a., type II secretion system protein M from Escherichia coli ECRC100

 Score = 74.3 bits (181), Expect = 9e-19
 Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 6/152 (3%)

Query: 16  VTPREQKMVMGMGALTVLAIAYWGIWQPLSERTAQAQARLQTEKQLLSWVSENANDIVTL 75
           V+PRE+++++G  AL V+   Y+ +WQP   R  + +  +  EK  + W+ +   +I   
Sbjct: 11  VSPRERRLLIGCVALLVVVFVYYVLWQPWLIREDKWRTVVTREKNTVEWMKQQVPNI--- 67

Query: 76  RAQGGSDAPSDQPL--NQVITNSTRQFNIELIRVQPRGEMMQVWIQPLPFSQLVSWIAYL 133
           + +  S     +PL  +  +T ++  + + + R+QP+GE + V + P+ F+ L+ W+  L
Sbjct: 68  KRREASMPEQGEPLGLSAAVTRTSAAYGVSVTRLQPQGERLAVTLAPVEFNALMQWLTQL 127

Query: 134 QERQGVSVDAIDI-DRGKVNGVVEVKRLQLKR 164
           + R  +     D+  +G   G V V RL L +
Sbjct: 128 ERRHRIRTMVFDVAAQGNPPGQVTVNRLVLSQ 159